RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 hCG_2039718K7EN88 272 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 HNRNPRO43390 633 aaKnown RBP16.08■□□□□ 0.16
RNF4-209ENST00000507784 ZNF354AO60765 605 aaPredicted RBP16.08■□□□□ 0.16
RNF4-209ENST00000507784 ABCB7O75027 752 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 ITGA10O75578 1167 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 PPM1BO75688 479 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 FABP3P05413 133 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 ANPEPP15144 967 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 WT1P19544 449 aaPredicted RBP16.08■□□□□ 0.16
RNF4-209ENST00000507784 ITGA3P26006 1051 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 GRAMD1BQ3KR37 738 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 DHRS4L2Q6PKH6 230 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 ZDHHC21Q8IVQ6 265 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 SLC5A8Q8N695 610 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 SLC15A4Q8N697 577 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 BRIX1Q8TDN6 353 aaKnown RBP16.08■□□□□ 0.16
RNF4-209ENST00000507784 RASL10BQ96S79 203 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 ARMC7Q9H6L4 198 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 UBQLN4Q9NRR5 601 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 ARMC1Q9NVT9 282 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 FLRT3Q9NZU0 649 aa16.08■□□□□ 0.16
RNF4-209ENST00000507784 NKX1-2Q9UD57 310 aaPredicted RBP16.08■□□□□ 0.16
RNF4-209ENST00000507784 YARS2Q9Y2Z4 477 aaKnown RBP16.08■□□□□ 0.16
RNF4-209ENST00000507784 TMEM229AB2RXF0 380 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 SCDO00767 359 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 ICOSLGO75144 302 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 THBS1P07996 1170 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 RPS4Y1P22090 263 aaKnown RBP16.07■□□□□ 0.16
RNF4-209ENST00000507784 LCN1P31025 176 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 PRKAR1BP31321 381 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 FBXW4P57775 412 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 MLF1P58340 268 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 CHAF1BQ13112 559 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 AIMP2Q13155 320 aaKnown RBP16.07■□□□□ 0.16
RNF4-209ENST00000507784 EFR3AQ14156 821 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 ZNF141Q15928 474 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 EIPR1Q53HC9 387 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 IRAK1BP1Q5VVH5 260 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 CARM1Q86X55 608 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 CLIP4Q8N3C7 705 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 ZNF527Q8NB42 609 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 CLEC1AQ8NC01 280 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 PAPD5Q8NDF8 572 aaKnown RBP16.07■□□□□ 0.16
RNF4-209ENST00000507784 OR4C3Q8NH37 302 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 GEMIN6Q8WXD5 167 aaKnown RBP16.07■□□□□ 0.16
RNF4-209ENST00000507784 ASB15Q8WXK1 588 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 THAP4Q8WY91 577 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 LRTOMTQ8WZ04 291 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 RSPO3Q9BXY4 272 aaPredicted RBP16.07■□□□□ 0.16
RNF4-209ENST00000507784 RNPEPL1Q9HAU8 725 aa16.07■□□□□ 0.16
RNF4-209ENST00000507784 AHCTF1Q8WYP5 2266 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 NINQ8N4C6 2090 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 OR6C70A6NIJ9 312 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 CLDN24A6NM45 220 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 M0R3H8 397 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 GNGT2O14610 69 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 MAN1A2O60476 641 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 UGT2B11O75310 529 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 OXSR1O95747 527 aaPredicted RBP16.06■□□□□ 0.16
RNF4-209ENST00000507784 LGI1O95970 557 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 FCGR1AP12314 374 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 NAGAP17050 411 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 FASP25445 335 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 YAP1P46937 504 aaKnown RBP16.06■□□□□ 0.16
RNF4-209ENST00000507784 TMED10P49755 219 aaKnown RBP16.06■□□□□ 0.16
RNF4-209ENST00000507784 SSR4P51571 173 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 RRADP55042 308 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 SESN3P58005 492 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 B3GNTL1Q67FW5 361 aaPredicted RBP16.06■□□□□ 0.16
RNF4-209ENST00000507784 JMJD6Q6NYC1 403 aaPredicted RBP16.06■□□□□ 0.16
RNF4-209ENST00000507784 OPN5Q6U736 354 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 IL20RBQ6UXL0 311 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 NUP54Q7Z3B4 507 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 AMIGO2Q86SJ2 522 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 TMEM156Q8N614 296 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 GATSQ8NAP1 163 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 TMCO6Q96DC7 493 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 CCNL2Q96S94 520 aaPredicted RBP16.06■□□□□ 0.16
RNF4-209ENST00000507784 PKP2Q99959 881 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 DPH1Q9BZG8 443 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 LHPPQ9H008 270 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 CCDC86Q9H6F5 360 aaKnown RBP16.06■□□□□ 0.16
RNF4-209ENST00000507784 SLC9A8Q9Y2E8 581 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 DTNAQ9Y4J8 743 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 EXPH5Q8NEV8 1989 aa16.06■□□□□ 0.16
RNF4-209ENST00000507784 SERINC4A6NH21 518 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 A6NL46 340 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 NPIPB9F8W1W9 429 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 GTPBP1O00178 669 aaKnown RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 FRS3O43559 492 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 CYP7B1O75881 506 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 DIRAS1O95057 198 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 CST1P01037 141 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 SEMG1P04279 462 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 IFNW1P05000 195 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 ADRB1P08588 477 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 NID1P14543 1247 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 HOXB6P17509 224 aaKnown RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 TBXA2RP21731 343 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 SOX3P41225 446 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms