RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SLC13A4Q9UKG4 626 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 IFT52Q9Y366 437 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 NPFFR2Q9Y5X5 522 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 TO15178 435 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 ABCB7O75027 752 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 ICOSLGO75144 302 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 UTS2O95399 124 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 SEMG1P04279 462 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 DBIP07108 87 aaKnown RBP19.51■□□□□ 0.71
CPNE1-204ENST00000397443 PSMD4P55036 377 aaKnown RBP19.51■□□□□ 0.71
CPNE1-204ENST00000397443 SLC34A1Q06495 639 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 SNCBQ16143 134 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 HMBOX1Q6NT76 420 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 CARM1Q86X55 608 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 LACC1Q8IV20 430 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 TAGAPQ8N103 731 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 SIRT6Q8N6T7 355 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 GATSQ8NAP1 163 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 GEMIN6Q8WXD5 167 aaKnown RBP19.51■□□□□ 0.71
CPNE1-204ENST00000397443 ARSGQ96EG1 525 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 ZNF354BQ96LW1 612 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 PINK1Q9BXM7 581 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 FAM117AQ9C073 453 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 IL1RAPQ9NPH3 570 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 CHST2Q9Y4C5 530 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 CST1P01037 141 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 CYP4B1P13584 511 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 FASP25445 335 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 LRRC36Q1X8D7 754 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 GRAMD1BQ3KR37 738 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 MRPL2Q5T653 305 aaKnown RBP19.51■□□□□ 0.71
CPNE1-204ENST00000397443 ERMP1Q7Z2K6 904 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 OR4D11Q8NGI4 311 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 CDCP1Q9H5V8 836 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 WASF3Q9UPY6 502 aa19.51■□□□□ 0.71
CPNE1-204ENST00000397443 NKX2-8O15522 239 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 UGT2B11O75310 529 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 BCAS1O75363 584 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-204ENST00000397443 ITGA10O75578 1167 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 ICAM2P13598 275 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 HPGDP15428 266 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 WT1P19544 449 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-204ENST00000397443 RPS4Y1P22090 263 aaKnown RBP19.5■□□□□ 0.71
CPNE1-204ENST00000397443 PRKAR1BP31321 381 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 ATP12AP54707 1039 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 FBXW4P57775 412 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 HOXC5Q00444 222 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 PPP1R8Q12972 351 aaKnown RBP19.5■□□□□ 0.71
CPNE1-204ENST00000397443 LIN52Q52LA3 116 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 DEF8Q6ZN54 512 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 ICA1LQ8NDH6 482 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 POP5Q969H6 163 aaKnown RBP19.5■□□□□ 0.71
CPNE1-204ENST00000397443 C7orf34Q96L11 122 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 AMBRA1Q9C0C7 1298 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 YY1AP1Q9H869 796 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 RIMS3Q9UJD0 308 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 FRYQ5TBA9 3013 aa19.5■□□□□ 0.71
CPNE1-204ENST00000397443 DOCK10Q96BY6 2186 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 MED13Q9UHV7 2174 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 J3KTA2 159 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 TSPAN2O60636 221 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 NADKO95544 446 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-204ENST00000397443 NID1P14543 1247 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 DCAF10Q5QP82 559 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 BRIX1Q8TDN6 353 aaKnown RBP19.49■□□□□ 0.71
CPNE1-204ENST00000397443 THOC3Q96J01 351 aaKnown RBP19.49■□□□□ 0.71
CPNE1-204ENST00000397443 RASL10BQ96S79 203 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 AGPAT4Q9NRZ5 378 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 PCDHGA10Q9Y5H3 936 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 APC2O95996 2303 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 CNTRLQ7Z7A1 2325 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 GNGT2O14610 69 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 HS6ST1O60243 411 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 CYP7B1O75881 506 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 LGI1O95970 557 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 IFNW1P05000 195 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 EEF1A1P68104 462 aaKnown RBP19.49■□□□□ 0.71
CPNE1-204ENST00000397443 TRIP10Q15642 601 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 B3GNTL1Q67FW5 361 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-204ENST00000397443 KBTBD2Q8IY47 623 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 PRR14Q9BWN1 585 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 CTPS2Q9NRF8 586 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 UBQLN4Q9NRR5 601 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 NDUFAF4Q9P032 175 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 SLC9A8Q9Y2E8 581 aa19.49■□□□□ 0.71
CPNE1-204ENST00000397443 NPIPB9F8W1W9 429 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 PPM1BO75688 479 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 OXSR1O95747 527 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-204ENST00000397443 LDLRP01130 860 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 SERPINA7P05543 415 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 THBS1P07996 1170 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 GKN3PP0CG01 181 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 FCGR1AP12314 374 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 MAGEA2P43356 314 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 CHAF1BQ13112 559 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 GANABQ14697 944 aaKnown RBP19.48■□□□□ 0.71
CPNE1-204ENST00000397443 NDUFAF6Q330K2 333 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 LPCAT4Q643R3 524 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 DHRS4L2Q6PKH6 230 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 TSEN54Q7Z6J9 526 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms