RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CDC73Q6P1J9 531 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 FIGNL1Q6PIW4 674 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 ADGRE4PQ86SQ3 457 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 LACC1Q8IV20 430 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 OR4K17Q8NGC6 315 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 OR4C3Q8NH37 302 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 ZPLD1Q8TCW7 415 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 DUSP19Q8WTR2 217 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 ARL8AQ96BM9 186 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 STACQ99469 402 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 G6PC3Q9BUM1 346 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 PIGUQ9H490 435 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 SDHAF3Q9NRP4 125 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 DUSP22Q9NRW4 184 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 THAP1Q9NVV9 213 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 DKKL1Q9UK85 242 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 SNX8Q9Y5X2 465 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 MED12LQ86YW9 2145 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 MBD3L4A6NDZ8 208 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-203ENST00000368439 MBD3L3A6NE82 208 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-203ENST00000368439 MBD3L5A6NJ08 208 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-203ENST00000368439 CD8B2A6NJW9 211 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 FAM47E-STBD1D6RA91 191 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 OXSR1O95747 527 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-203ENST00000368439 ANGPTL1O95841 491 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 LBPP18428 481 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 CHMP24386 653 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 CLDN18P56856 261 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 PHC1P78364 1004 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 OCRLQ01968 901 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 STX5Q13190 355 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 CCNJQ5T5M9 372 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 OR4F3Q6IEY1 312 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 CLECL1Q8IZS7 167 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 OR8J2Q8NGG1 315 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 OR56A1Q8NGH5 318 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 MBD3L2Q8NHZ7 208 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-203ENST00000368439 RAB3IL1Q8TBN0 382 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 SFXN5Q8TD22 340 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 CDS1Q92903 461 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 TUBA1CQ9BQE3 449 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 RUBCNLQ9H714 662 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 CALHM2Q9HA72 323 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 NEUROD4Q9HD90 331 aa17.17■□□□□ 0.34
CKS1B-203ENST00000368439 HSPB2A8KAH6 182 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 ALG1L2C9J202 215 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 ALDOCP09972 364 aaKnown RBP17.16■□□□□ 0.34
CKS1B-203ENST00000368439 ZNF708P17019 499 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 TBXA2RP21731 343 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 LCN1P31025 176 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 GCKP35557 465 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 CLK3P49761 638 aaKnown RBP17.16■□□□□ 0.34
CKS1B-203ENST00000368439 HSPB2Q16082 182 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 PGS1Q32NB8 556 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 AGBL2Q5U5Z8 902 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 ENPP6Q6UWR7 440 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 COX18Q8N8Q8 333 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 RELL2Q8NC24 303 aaPredicted RBP17.16■□□□□ 0.34
CKS1B-203ENST00000368439 TESCQ96BS2 214 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 MOAP1Q96BY2 351 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 DTNBP1Q96EV8 351 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 SFXN2Q96NB2 322 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 UCN2Q96RP3 112 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 TRIB1Q96RU8 372 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 BTBD2Q9BX70 525 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 ACTRT3Q9BYD9 372 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 TBL1XR1Q9BZK7 514 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 DPY30Q9C005 99 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 NKIRAS1Q9NYS0 192 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 RPH3AQ9Y2J0 694 aaPredicted RBP17.16■□□□□ 0.34
CKS1B-203ENST00000368439 KCNE3Q9Y6H6 103 aa17.16■□□□□ 0.34
CKS1B-203ENST00000368439 PDZD2O15018 2839 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 RNASET2O00584 256 aaKnown RBP17.15■□□□□ 0.34
CKS1B-203ENST00000368439 HDAC3O15379 428 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 TCEA1P23193 301 aaKnown RBP17.15■□□□□ 0.34
CKS1B-203ENST00000368439 ZNF136P52737 540 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 POU6F2P78424 691 aaPredicted RBP17.15■□□□□ 0.34
CKS1B-203ENST00000368439 C17orf67Q0P5P2 114 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 TP53BP2Q13625 1128 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 GANABQ14697 944 aaKnown RBP17.15■□□□□ 0.34
CKS1B-203ENST00000368439 SF3B4Q15427 424 aaKnown RBP eCLIP17.15■□□□□ 0.344e-8■□□□□ 8.6
CKS1B-203ENST00000368439 SLC25A35Q3KQZ1 300 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 ATG16L1Q676U5 607 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 AAGABQ6PD74 315 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 MEX3BQ6ZN04 569 aaKnown RBP17.15■□□□□ 0.34
CKS1B-203ENST00000368439 WDR75Q8IWA0 830 aaKnown RBP17.15■□□□□ 0.34
CKS1B-203ENST00000368439 C9orf106Q8NAJ2 232 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 OR5AK3PQ8NH89 298 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 JADE3Q92613 823 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 C1GALT1C1Q96EU7 318 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 SERHL2Q9H4I8 314 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 MANSC1Q9H8J5 431 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 CSMD2Q7Z408 3487 aa17.15■□□□□ 0.34
CKS1B-203ENST00000368439 KLF11O14901 512 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 CFLARO15519 480 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 HK1P19367 917 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 CLDN15P56746 228 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 SRYQ05066 204 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 BCL2A1Q16548 175 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 TMEM44Q2T9K0 475 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms