RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TMEM108Q6UXF1 575 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 RNF165Q6ZSG1 346 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 WDR75Q8IWA0 830 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TXLNBQ8N3L3 684 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR4K14Q8NGD5 310 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 RHEBL1Q8TAI7 183 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 FNDC9Q8TBE3 224 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 POC1BQ8TC44 478 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 NEUROG1Q92886 237 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 SERPINI1Q99574 410 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 RBBP8Q99708 897 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 ALKBH4Q9NXW9 302 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MOCS1Q9NZB8 636 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 NUDT4Q9NZJ9 180 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MCTS1Q9ULC4 181 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 DNAH9Q9NYC9 4486 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 UBFD1O14562 309 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 GNB5O14775 395 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TPM3P06753 285 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 GAAP10253 952 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 SSTR4P31391 388 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 C17orf67Q0P5P2 114 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 IFT88Q13099 833 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 CUL1Q13616 776 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF267Q14586 743 aaPredicted RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 CRYMQ14894 314 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 RBBP5Q15291 538 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TGFBIQ15582 683 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 HIST2H2ACQ16777 129 aaPredicted RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 HIST2H2AA3Q6FI13 130 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 AADACL2Q6P093 401 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 C3orf56Q8N813 242 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 WDR31Q8NA23 367 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 ITPAQ9BY32 194 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PCDHB14Q9Y5E9 798 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PMF1-BGLAPU3KQ54 211 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TCRBV7S3A2A0A539 114 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 CTAGE9A4FU28 777 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 LINGO3P0C6S8 592 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 THOC5Q13769 683 aaKnown RBP5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 BEAN1Q3B7T3 259 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF362Q5T0B9 420 aaPredicted RBP5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 C18orf63Q68DL7 685 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 GLCCI1Q86VQ1 547 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 NUDT13Q86X67 352 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMEM86BQ8N661 226 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 KISS1RQ969F8 398 aaPredicted RBP5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 RUNDC3BQ96NL0 473 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 DOK1Q99704 481 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 KLHL4Q9C0H6 718 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 ALG2Q9H553 416 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 FBXO34Q9NWN3 711 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 DKKL1Q9UK85 242 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 GRID1Q9ULK0 1009 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 PCNX3Q9H6A9 2034 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 MPDZO75970 2070 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 MYO1GB0I1T2 1018 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 E7ESA3 106 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 E7EVH7 732 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 GUCY1B2O75343 617 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 DEAF1O75398 565 aaPredicted RBP5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 CTAGE8P0CG41 777 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 COL6A2P12110 1019 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 HSD3B1P14060 373 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 HSD3B2P26439 372 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 IDH3GP51553 393 aaPredicted RBP5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 CLDN20P56880 219 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 PLCXD2Q0VAA5 305 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 RBM20Q5T481 1227 aaKnown RBP5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR7E24Q6IFN5 339 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 CTAGE4Q8IX94 777 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 TRIM58Q8NG06 486 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 NTMT1Q9BV86 223 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 USP22Q9UPT9 525 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 PCDHGA11Q9Y5H2 935 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 PTGDR2Q9Y5Y4 395 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 ARFGEF3Q5TH69 2177 aa5.23□□□□□ -1.57
CDC42SE2-201ENST00000360515 SYCE3A1L190 88 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 GJE1A6NN92 205 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 PHGDHO43175 533 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 SMNDC1O75940 238 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 PRKD3O94806 890 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 KRT15P19012 456 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 PGCP20142 388 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 IGHV1-2P23083 117 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 FRKP42685 505 aaPredicted RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 STARP49675 285 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 GYS2P54840 703 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 GABRA6Q16445 453 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 GALNT18Q6P9A2 607 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZC3HC1Q86WB0 502 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR52B6Q8NGF0 335 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR10D3Q8NH80 312 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 TSNARE1Q96NA8 513 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 COQ10BQ9H8M1 238 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLC17A5Q9NRA2 495 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 ABCA1O95477 2261 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 TRAF3IP2O43734 574 aaPredicted RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 STK16O75716 305 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 CD1DP15813 335 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms