RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NELFAQ9H3P2 528 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 THAP10Q9P2Z0 257 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PRELID1Q9Y255 219 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC35A3Q9Y2D2 325 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 AURKAO14965 403 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 GPR4P46093 362 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 NOVA1P51513 510 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PRKXP51817 358 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 NKX3-2P78367 333 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 TRAM1Q15629 374 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PPP1R3AQ16821 1122 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CYS1Q717R9 158 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 TEX26Q8N6G2 289 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 UTP4Q969X6 686 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 MUS81Q96NY9 551 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SECISBP2Q96T21 854 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 MMP27Q9H306 513 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR51B6Q9H340 312 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF160Q9HCG1 818 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 GSKIPQ9P0R6 139 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CCL26Q9Y258 94 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PIGBOS1A0A0B4J2F0 54 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 KANTRA0A1W2PQU2 76 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 YY2O15391 372 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CACNG3O60359 315 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 GABBR2O75899 941 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CD40LGP29965 261 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ADH7P40394 386 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 AP2S1P53680 142 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC26A5P58743 744 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 FOXC1Q12948 553 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ADIPOR2Q86V24 386 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ESX1Q8N693 406 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 KDM1BQ8NB78 822 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR52N2Q8NGI0 321 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR4K13Q8NH42 304 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PLEK2Q9NYT0 353 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF69Q9UC07 566 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SEC14L4Q9UDX3 406 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 KIAA0100Q14667 2235 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 LOC102725191A0A1B0GVB3 256 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SMCO3A2RU48 225 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 WASH4PA8MWX3 477 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CDRT1O95170 752 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PYCR1P32322 319 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 IDUAP35475 653 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ADAM15Q13444 863 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CGB2Q6NT52 195 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF584Q8IVC4 421 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF619Q8N2I2 560 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 TMEM130Q8N3G9 435 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SYNPOQ8N3V7 929 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PAPD5Q8NDF8 572 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 C22orf15Q8WYQ4 148 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 FUBP1Q96AE4 644 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 EDEM2Q9BV94 578 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PAPOLGQ9BWT3 736 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 EPHX3Q9H6B9 360 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CSNK1G1Q9HCP0 422 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SPHK1Q9NYA1 384 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 RNF6Q9Y252 685 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 TMEM184BQ9Y519 407 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 F5H5K5 113 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SDHDO14521 159 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OXSR1O95747 527 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ELK4P28324 431 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 HLCSP50747 726 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF45Q02386 682 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 GRB7Q14451 532 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 WSCD2Q2TBF2 565 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 KCTD9Q7L273 389 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR52R1Q8NGF1 315 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR1J4Q8NGS1 313 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR51Q1Q8NH59 317 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF778Q96MU6 729 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CTRCQ99895 268 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF471Q9BX82 626 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ATG5Q9H1Y0 275 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC6A15Q9H2J7 730 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 AIG1Q9NVV5 245 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 EBF1Q9UH73 591 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PGAP2Q9UHJ9 254 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PCDHGA8Q9Y5G5 932 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 GON4LQ3T8J9 2241 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 ARHGEF15O94989 841 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 S100A6P06703 90 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 CELP19835 753 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 CLDN10P78369 228 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 NKPD1Q17RQ9 610 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 LRRN1Q6UXK5 716 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 MMP21Q8N119 569 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 CHFRQ96EP1 664 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC41A3Q96GZ6 507 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 BARD1Q99728 777 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC30A2Q9BRI3 323 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 FUZQ9BT04 418 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 DMRT3Q9NQL9 472 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 WBP1LQ9NX94 342 aa9.23□□□□□ -0.93
CLTCL1-211ENST00000621271 KLHL13Q9P2N7 655 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms