RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TMEM184AQ6ZMB5 413 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 TMEM126BQ8IUX1 230 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 RASGRP3Q8IV61 690 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 GATAD2BQ8WXI9 593 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OR6C1Q96RD1 312 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 IFT27Q9BW83 186 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 HCN4Q9Y3Q4 1203 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 TSC22D4Q9Y3Q8 395 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 CEPT1Q9Y6K0 416 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 MED13LQ71F56 2210 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 LAMTOR5O43504 91 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 MMP11P24347 488 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 NDUFS1P28331 727 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 IFNA8P32881 189 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 CDC42P60953 191 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 SQSTM1Q13501 440 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 FAM53BQ14153 422 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 TRIM61Q5EBN2 209 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 SHQ1Q6PI26 577 aaKnown RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 SLCO6A1Q86UG4 719 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 GKN2Q86XP6 184 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ORAI1Q96D31 301 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ENKD1Q9H0I2 346 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ABCB10Q9NRK6 738 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 CAB39Q9Y376 341 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 THADAQ6YHU6 1953 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 MAP1AP78559 2803 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 METTL12A8MUP2 240 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ZNF749O43361 778 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 NDUFB5O43674 189 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 PTHP01270 115 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ITIH1P19827 911 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ARRB1P49407 418 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 ISL1P61371 349 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ADARB1P78563 741 aaKnown RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 CRYZQ08257 329 aaKnown RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 TRIM16LQ309B1 348 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 PUS10Q3MIT2 529 aaKnown RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 ZER1Q7Z7L7 766 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 SLC25A45Q8N413 288 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 CLDN22Q8N7P3 220 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 PSMA8Q8TAA3 256 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 C1GALT1C1Q96EU7 318 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 C11orf24Q96F05 449 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 C20orf141Q9NUB4 165 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 H2AFY2Q9P0M6 372 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 RPS6KB2Q9UBS0 482 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 PCDHGA2Q9Y5H1 932 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ZNF407Q9C0G0 2248 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 OTOGLQ3ZCN5 2332 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 PRR14LQ5THK1 2151 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 ANKRD61A6NGH8 418 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 HCRTR2O43614 444 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 KIR2DS3Q14952 304 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 MICAQ29983 383 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 METAP1DQ6UB28 335 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 B3GNT7Q8NFL0 401 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 OR10H4Q8NGA5 316 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 OR13C2Q8NGS9 318 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 BAHD1Q8TBE0 780 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 GAL3ST3Q96A11 431 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 CCDC74AQ96AQ1 378 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 NEURL3Q96EH8 262 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 UCK2Q9BZX2 261 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 NFKBIL1Q9UBC1 381 aaPredicted RBP9.58□□□□□ -0.88
RFFL-212ENST00000584655 CORO2BQ9UQ03 480 aa9.58□□□□□ -0.88
RFFL-212ENST00000584655 CLDN4O14493 209 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ZNHIT1O43257 154 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 F13BP05160 661 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ZNF10P21506 573 aaPredicted RBP9.57□□□□□ -0.88
RFFL-212ENST00000584655 CD27P26842 260 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 SERPINB10P48595 397 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 TNFRSF17Q02223 184 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 PLBD1Q6P4A8 553 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 GJD3Q8N144 294 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 TTLQ8NG68 377 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 OR4K13Q8NH42 304 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 TSSK2Q96PF2 358 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 NDC1Q9BTX1 674 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 TMED9Q9BVK6 235 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ITPAQ9BY32 194 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 PCDHGA6Q9Y5G7 932 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 A0A087WUU8 490 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 H3BMQ9 156 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ZIC2O95409 532 aaPredicted RBP9.57□□□□□ -0.88
RFFL-212ENST00000584655 HTR1AP08908 422 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ACP2P11117 423 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 FUT5Q11128 374 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ZNHIT3Q15649 155 aaPredicted RBP9.57□□□□□ -0.88
RFFL-212ENST00000584655 ZC3H12BQ5HYM0 836 aaKnown RBP9.57□□□□□ -0.88
RFFL-212ENST00000584655 PRAMEF20Q5VT98 475 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 GTF2IRD2BQ6EKJ0 949 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 MTFR2Q6P444 385 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 GTF2IRD2Q86UP8 949 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 SVOPLQ8N434 492 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 SLC38A4Q969I6 547 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 COG8Q96MW5 612 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 SNTG1Q9NSN8 517 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ING1Q9UK53 422 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms