RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 DOCK10Q96BY6 2186 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 GXYLT2A0PJZ3 443 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 EFSO43281 561 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 THBS1P07996 1170 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 CHRM4P08173 479 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 UMPSP11172 480 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ITGAMP11215 1152 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 NCK1P16333 377 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 KDELR2P33947 212 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 DCTP40126 519 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 EIF2S3P41091 472 aaKnown RBP10.34□□□□□ -0.75
SHMT2-220ENST00000555634 MAP3K8P41279 467 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ADRM1Q16186 407 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF311Q5JNZ3 666 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 CCNJQ5T5M9 372 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 TCTN3Q6NUS6 607 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ZFP1Q6P2D0 407 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 UNQ6494/PRO21346Q6UXR6 183 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 CYP2R1Q6VVX0 501 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 NPSR1Q6W5P4 371 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 CCDC80Q76M96 950 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 SPACA3Q8IXA5 215 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 CMIPQ8IY22 773 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 SIRT6Q8N6T7 355 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ANKFN1Q8N957 763 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 OR52E4Q8NGH9 312 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 BRIX1Q8TDN6 353 aaKnown RBP10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ZCCHC14Q8WYQ9 949 aaKnown RBP10.34□□□□□ -0.75
SHMT2-220ENST00000555634 TM9SF4Q92544 642 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 EFHD2Q96C19 240 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-220ENST00000555634 SPACA9Q96E40 222 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-220ENST00000555634 TPD52L3Q96J77 140 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 SDF2Q99470 211 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 PCDHAC1Q9H158 963 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ING2Q9H160 280 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 METTL7AQ9H8H3 244 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 SDHAF3Q9NRP4 125 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 GPR83Q9NYM4 423 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 KLRF1Q9NZS2 232 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ANAPC2Q9UJX6 822 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF223Q9UK11 482 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-220ENST00000555634 MKLN1Q9UL63 735 aa10.34□□□□□ -0.75
SHMT2-220ENST00000555634 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
SHMT2-220ENST00000555634 DSPPQ9NZW4 1301 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 DHRS12A0PJE2 317 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 TLX3O43711 291 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 FCGR1AP12314 374 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 ITGA2P17301 1181 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 PRKAR1BP31321 381 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 MSX2P35548 267 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 GZMMP51124 257 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 OC90Q02509 493 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 CHRNB3Q05901 458 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 FXNQ16595 210 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 DEFB109BQ30KR1 87 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 CYBRD1Q53TN4 286 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 RPS26P11Q5JNZ5 115 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 ACER2Q5QJU3 275 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 EXOSC6Q5RKV6 272 aaKnown RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 TYW3Q6IPR3 259 aaKnown RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 FRRS1Q6ZNA5 592 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 NUP54Q7Z3B4 507 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 RANBP3LQ86VV4 465 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 CYP4Z1Q86W10 505 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 SPPL2CQ8IUH8 684 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 MISPQ8IVT2 679 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 PRR22Q8IZ63 422 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 TMCO5AQ8N6Q1 288 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF441Q8N8Z8 693 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 OR52P1PQ8NH57 321 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 GEMIN6Q8WXD5 167 aaKnown RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 TTC9Q92623 222 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 GATA6Q92908 595 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 SLC47A1Q96FL8 570 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 RASL10BQ96S79 203 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 ADOQ96SZ5 270 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 MESP1Q9BRJ9 268 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 UTP23Q9BRU9 249 aaKnown RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 PINK1Q9BXM7 581 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 CDCP1Q9H5V8 836 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 AURKCQ9UQB9 309 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF443Q9Y2A4 671 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 SLC35A3Q9Y2D2 325 aa10.33□□□□□ -0.76
SHMT2-220ENST00000555634 GPC6Q9Y625 555 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-220ENST00000555634 CFAP47Q6ZTR5 3102 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 KMT2BQ9UMN6 2715 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 AGAP5A6NIR3 686 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 FAM47E-STBD1D6RA91 191 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 ANKRD65E5RJM6 399 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 GTPBP1O00178 669 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 NKX2-8O15522 239 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 FKBP6O75344 327 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 NME6O75414 186 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 UTS2O95399 124 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 IFNW1P05000 195 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 NGFRP08138 427 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 FBXO45P0C2W1 286 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 PABPC4LP0CB38 370 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 NID1P14543 1247 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms