RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 LAMC3Q9Y6N6 1575 aa0.68□□□□□ -2.3
SGMS1-205ENST00000498514 MYO16Q9Y6X6 1858 aa0.68□□□□□ -2.3
SGMS1-205ENST00000498514 MYCBP2O75592 4640 aa0.68□□□□□ -2.3
SGMS1-205ENST00000498514 NISCHQ9Y2I1 1504 aa0.68□□□□□ -2.3
SGMS1-205ENST00000498514 APCP25054 2843 aa0.68□□□□□ -2.3
SGMS1-205ENST00000498514 MAP1AP78559 2803 aaPredicted RBP0.68□□□□□ -2.3
SGMS1-205ENST00000498514 TMEM131LA2VDJ0 1609 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 A2MP01023 1474 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 CAMSAP2Q08AD1 1489 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 TCOF1Q13428 1488 aaKnown RBP0.67□□□□□ -2.3
SGMS1-205ENST00000498514 PKHD1P08F94 4074 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 GLI2P10070 1586 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 TTC37Q6PGP7 1564 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 LRP1BQ9NZR2 4599 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 MGAM2Q2M2H8 2515 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 CSMD3Q7Z407 3707 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 SVILO95425 2214 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 YJEFN3A6XGL0 299 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 PRB1P04280 392 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 CPT2P23786 658 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 SAA4P35542 130 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 ACTN2P35609 894 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 OTUD4Q01804 1114 aaKnown RBP0.67□□□□□ -2.3
SGMS1-205ENST00000498514 OC90Q02509 493 aaPredicted RBP0.67□□□□□ -2.3
SGMS1-205ENST00000498514 PUDPQ08623 228 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 SPHARQ15513 63 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 OR1C1Q15619 314 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 CHST3Q7LGC8 479 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 SIX6OS1Q8N1H7 587 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 C6orf223Q8N319 242 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 FGGYQ96C11 551 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 TSNARE1Q96NA8 513 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 SLC25A23Q9BV35 468 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 OSBPL11Q9BXB4 747 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 NUSAP1Q9BXS6 441 aaKnown RBP0.67□□□□□ -2.3
SGMS1-205ENST00000498514 LRRC2Q9BYS8 371 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 EXOSC3Q9NQT5 275 aaKnown RBP0.67□□□□□ -2.3
SGMS1-205ENST00000498514 ONECUT1Q9UBC0 465 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 C3P01024 1663 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 KCPQ6ZWJ8 1503 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 DLC1Q96QB1 1528 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 PAPPA2Q9BXP8 1791 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 FAT1Q14517 4588 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 MED14O60244 1454 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 RALGAPBQ86X10 1494 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 FANCD2Q9BXW9 1451 aa0.67□□□□□ -2.3
SGMS1-205ENST00000498514 ARHGEF28Q8N1W1 1705 aaKnown RBP0.67□□□□□ -2.3
SGMS1-205ENST00000498514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.66□□□□□ -2.38e-12■■■■■ 44.3
SGMS1-205ENST00000498514 TICRRQ7Z2Z1 1910 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 TET3O43151 1660 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 COL4A5P29400 1685 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 RREB1Q92766 1687 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 PRG4Q92954 1404 aaPredicted RBP0.66□□□□□ -2.3
SGMS1-205ENST00000498514 IQANK1A0A1B0GTG1 560 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 ILVBLA1L0T0 632 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 PDE5AO76074 875 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 SLC25A27O95847 323 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 PNPP00491 289 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 MYBL1P10243 752 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 GHRP10912 638 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 MBL2P11226 248 aaPredicted RBP0.66□□□□□ -2.3
SGMS1-205ENST00000498514 NF2P35240 595 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 RXRGP48443 463 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 MAP2K1Q02750 393 aaPredicted RBP0.66□□□□□ -2.3
SGMS1-205ENST00000498514 ZNF85Q03923 595 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 GABPAQ06546 454 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 SYPL1Q16563 259 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 ZNF311Q5JNZ3 666 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 ERMARDQ5T6L9 678 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 LGSNQ5TDP6 509 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 MEDAGQ5VYS4 303 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 ITPRIPL1Q6GPH6 555 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 ARSKQ6UWY0 536 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 CXCL17Q6UXB2 119 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 GPR142Q7Z601 462 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 OR2AP1Q8NGE2 309 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 OR51G1Q8NGK1 321 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 STARD8Q92502 1023 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 RIT1Q92963 219 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 RNF185Q96GF1 192 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 SPATA17Q96L03 361 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 SPAG8Q99932 426 aaPredicted RBP0.66□□□□□ -2.3
SGMS1-205ENST00000498514 TM2D1Q9BX74 207 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 ULBP2Q9BZM5 246 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 NARFLQ9H6Q4 476 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 LMAN1LQ9HAT1 526 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 GPR173Q9NS66 373 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 BARX2Q9UMQ3 279 aaPredicted RBP0.66□□□□□ -2.3
SGMS1-205ENST00000498514 SLC9A8Q9Y2E8 581 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 LIPGQ9Y5X9 500 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 TEX264Q9Y6I9 313 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 CNTNAP1P78357 1384 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 CACNA1EQ15878 2313 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 FMN2Q9NZ56 1722 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 MAST1Q9Y2H9 1570 aa0.66□□□□□ -2.3
SGMS1-205ENST00000498514 KDM5AP29375 1690 aaKnown RBP0.65□□□□□ -2.3
SGMS1-205ENST00000498514 CUL7Q14999 1698 aa0.65□□□□□ -2.3
SGMS1-205ENST00000498514 COL18A1P39060 1754 aa0.65□□□□□ -2.3
SGMS1-205ENST00000498514 DNAH6Q9C0G6 4158 aa0.65□□□□□ -2.3
SGMS1-205ENST00000498514 MED13LQ71F56 2210 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms