RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 TUBB1Q9H4B7 451 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 JPT2Q9H910 190 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 UTP6Q9NYH9 597 aaKnown RBP4.99□□□□□ -1.61
SMC2-205ENST00000493955 C6orf203Q9P0P8 240 aaPredicted RBP4.99□□□□□ -1.61
SMC2-205ENST00000493955 CTSZQ9UBR2 303 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 MUTYHQ9UIF7 546 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 HPCAL4Q9UM19 191 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 GSTK1Q9Y2Q3 226 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 SPACA6W5XKT8 324 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 CCDC88BA6NC98 1476 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 IFT140Q96RY7 1462 aa4.99□□□□□ -1.61
SMC2-205ENST00000493955 ZSCAN5CA6NGD5 496 aaPredicted RBP4.98□□□□□ -1.61
SMC2-205ENST00000493955 HMMRO75330 724 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 SNRPCP09234 159 aaKnown RBP4.98□□□□□ -1.61
SMC2-205ENST00000493955 WNT2P09544 360 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 HOXB6P17509 224 aaKnown RBP4.98□□□□□ -1.61
SMC2-205ENST00000493955 MAGEA5P43359 124 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 GSK3BP49841 420 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 RPS6P62753 249 aaKnown RBP4.98□□□□□ -1.61
SMC2-205ENST00000493955 IRX1P78414 480 aaPredicted RBP4.98□□□□□ -1.61
SMC2-205ENST00000493955 KLHL22Q53GT1 634 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 VWA2Q5GFL6 755 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 FAM182AQ5T1J6 154 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 ARMCX5Q6P1M9 558 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 SCYL2Q6P3W7 929 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 PARGQ86W56 976 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 TMEM17Q86X19 198 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 ZCCHC7Q8N3Z6 543 aaKnown RBP4.98□□□□□ -1.61
SMC2-205ENST00000493955 ARL14Q8N4G2 192 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 FNDC8Q8TC99 324 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 LINC00479Q96M42 142 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 AGAP3Q96P47 875 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 TRIM51Q9BSJ1 452 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 RHOJQ9H4E5 214 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 CYTH4Q9UIA0 394 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 SMC3Q9UQE7 1217 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 GON4LQ3T8J9 2241 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 DNMBPQ6XZF7 1577 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 PTCH1Q13635 1447 aa4.98□□□□□ -1.61
SMC2-205ENST00000493955 ESYT2A0FGR8 921 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 FAM74A7A6NL05 159 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 EPM2AB3EWF7 344 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 SEMA4FO95754 770 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 JCHAINP01591 159 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 IGFBP1P08833 259 aaPredicted RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 BCKDHAP12694 445 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 UQCRC2P22695 453 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 LRRC74AQ0VAA2 488 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ATXN7L3Q14CW9 347 aaPredicted RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 PDK3Q15120 406 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ZIC1Q15915 447 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 FAM74A3Q4VXF1 159 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 C14orf28Q4W4Y0 310 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ZC2HC1BQ5TFG8 222 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 EMBQ6PCB8 327 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 RFWD3Q6PCD5 774 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 LANCL3Q6ZV70 420 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 PRSS48Q7RTY5 328 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 HSD11B1LQ7Z5J1 315 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ZNF679Q8IYX0 411 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 TRMT10AQ8TBZ6 339 aaKnown RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 TBCKQ8TEA7 893 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 CRYGNQ8WXF5 182 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 MYLPFQ96A32 169 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 CCT7Q99832 543 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 OMDQ99983 421 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 LRRC40Q9H9A6 602 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ELOVL3Q9HB03 270 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 MRPL39Q9NYK5 338 aaKnown RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 ANAPC7Q9UJX3 599 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 MRPL11Q9Y3B7 192 aaKnown RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 WDR45Q9Y484 360 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ATP10DQ9P241 1426 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 WDR97A6NE52 1622 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 IGHV3OR16-12A0A075B7B8 117 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 IGHV3-16A0A0C4DH30 117 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 STX7O15400 261 aaKnown RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 DCXO43602 365 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 RAMP1O60894 148 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 IGHV3-9P01782 118 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 RPS2P15880 293 aaKnown RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 DPEP1P16444 411 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 XRCC1P18887 633 aaPredicted RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 HNF1AP20823 631 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 NTHL1P78549 312 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ELAVL2Q12926 359 aaKnown RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 MS4A13Q5J8X5 152 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 C9orf66Q5T8R8 295 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ADAM5Q6NVV9 412 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 PMF1Q6P1K2 205 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ZNF683Q8IZ20 524 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 C4orf32Q8N8J7 132 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 ANKFN1Q8N957 763 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 C18orf25Q96B23 403 aaPredicted RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 SDSLQ96GA7 329 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 TMEM121Q9BTD3 319 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 LRRC61Q9BV99 259 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 POLR3FQ9H1D9 316 aaPredicted RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 VCX2Q9H322 139 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms