RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 LRTM1Q9HBL6 345 aa11.27□□□□□ -0.61
COL6A1-205ENST00000492851 EML4Q9HC35 981 aaKnown RBP11.27□□□□□ -0.61
COL6A1-205ENST00000492851 PAQR5Q9NXK6 330 aaPredicted RBP11.27□□□□□ -0.61
COL6A1-205ENST00000492851 GALNT8Q9NY28 637 aa11.27□□□□□ -0.61
COL6A1-205ENST00000492851 ELOVL5Q9NYP7 299 aa11.27□□□□□ -0.61
COL6A1-205ENST00000492851 EIF3LQ9Y262 564 aaKnown RBP11.27□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF175Q9Y473 711 aa11.27□□□□□ -0.61
COL6A1-205ENST00000492851 AP4B1Q9Y6B7 739 aa11.27□□□□□ -0.61
COL6A1-205ENST00000492851 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.61
COL6A1-205ENST00000492851 INTS1Q8N201 2190 aaKnown RBP11.27□□□□□ -0.61
COL6A1-205ENST00000492851 CELSR1Q9NYQ6 3014 aa11.27□□□□□ -0.61
COL6A1-205ENST00000492851 AKAP9Q99996 3911 aa11.27□□□□□ -0.61
COL6A1-205ENST00000492851 A0A087WZY1 265 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 IGLV3-32A0A0A0MS00 114 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 A0A1W2PNV4 684 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 SH3D21A4FU49 640 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 AZIN1O14977 448 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 PDPK1O15530 556 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 SCO2O43819 266 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 TRIM13O60858 407 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 GABRA3P34903 492 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 RPL3P39023 403 aaKnown RBP11.26□□□□□ -0.61
COL6A1-205ENST00000492851 ASMTP46597 345 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 MANFP55145 182 aaKnown RBP11.26□□□□□ -0.61
COL6A1-205ENST00000492851 B3GALT5-AS1P59052 145 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 LRIG3Q6UXM1 1119 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 NATD1Q8N6N6 113 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 GPR151Q8TDV0 419 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 PPCDCQ96CD2 204 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 C1GALT1C1Q96EU7 318 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 CCT7Q99832 543 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 LIME1Q9H400 295 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 REEP4Q9H6H4 257 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 FANCFQ9NPI8 374 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 ACSS1Q9NUB1 689 aaPredicted RBP11.26□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF226Q9NYT6 803 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 MED11Q9P086 117 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 PLEKHA6Q9Y2H5 1048 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF337Q9Y3M9 751 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 CCL27Q9Y4X3 112 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 NCKAP5O14513 1909 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 ARHGAP21Q5T5U3 1957 aa11.26□□□□□ -0.61
COL6A1-205ENST00000492851 F8P00451 2351 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 TMEM114B3SHH9 223 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 EMC8O43402 210 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 NME6O75414 186 aaPredicted RBP11.25□□□□□ -0.61
COL6A1-205ENST00000492851 TNFSF13O75888 250 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 ANGPTL1O95841 491 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 TGM6O95932 706 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 NGFRP08138 427 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 FGF4P08620 206 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 FCGR2AP12318 317 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 HPGDP15428 266 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 KLK2P20151 261 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 SERPINB4P48594 390 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 SLC18A2Q05940 514 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 SGCBQ16585 318 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 DEFB113Q30KQ7 82 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 MISPQ8IVT2 679 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 UBQLNLQ8IYU4 475 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 GCNT2Q8N0V5 402 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 RIBC1Q8N443 379 aaPredicted RBP11.25□□□□□ -0.61
COL6A1-205ENST00000492851 CNEP1R1Q8N9A8 125 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 OR6Y1Q8NGX8 325 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 HOXB13Q92826 284 aaPredicted RBP11.25□□□□□ -0.61
COL6A1-205ENST00000492851 STARD4Q96DR4 205 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 PGM2Q96G03 612 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 PLEKHF2Q9H8W4 249 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 NEUROD4Q9HD90 331 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 SH3BP4Q9P0V3 963 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 NTMQ9P121 344 aa11.25□□□□□ -0.61
COL6A1-205ENST00000492851 OR2M5A3KFT3 312 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 NDUFB5O43674 189 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 NPHS1O60500 1241 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 SMNDC1O75940 238 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL6A1-205ENST00000492851 NKX2-2O95096 273 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 ATE1O95260 518 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 UTS2O95399 124 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 HRGP04196 525 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 SHBGP04278 402 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 CD8BP10966 210 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 TBXA2RP21731 343 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 MAPK1P28482 360 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 CPOXP36551 454 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 CD79BP40259 229 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 RFX3P48380 749 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 PRKAG1P54619 331 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 HSPB3Q12988 150 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 STX5Q13190 355 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 MLC1Q15049 377 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 PRSS53Q2L4Q9 553 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 KRTAP21-3Q3LHN1 58 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 FAM219BQ5XKK7 198 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 CLEC6AQ6EIG7 209 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 Q6ZSR9 355 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF551Q7Z340 670 aaPredicted RBP11.24□□□□□ -0.61
COL6A1-205ENST00000492851 MARCH3Q86UD3 253 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 C10orf107Q8IVU9 208 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 WDR75Q8IWA0 830 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms