RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PCDHGA6Q9Y5G7 932 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 PCNX2A6NKB5 2137 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 CDC14CA4D256 554 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 SYT5O00445 386 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 TO15178 435 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 PRKNO60260 465 aaPredicted RBP11.21□□□□□ -0.61
VPS16-206ENST00000466415 REM1O75628 298 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
VPS16-206ENST00000466415 IL33O95760 270 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 HPP00738 406 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 IGKV1D-16P01601 117 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 SEMG1P04279 462 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 ICAM2P13598 275 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 HPGDP15428 266 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 TNFRSF1BP20333 461 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 RTP5Q14D33 572 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 ATP6AP1Q15904 470 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 DUSP7Q16829 419 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 PLAG1Q6DJT9 500 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 DHRS4L2Q6PKH6 230 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 ZNF836Q6ZNA1 936 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 MRGPREQ86SM8 312 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 CYP4Z1Q86W10 505 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 CARM1Q86X55 608 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 PRR22Q8IZ63 422 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 ZNF527Q8NB42 609 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 ICA1LQ8NDH6 482 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 VANGL1Q8TAA9 524 aaPredicted RBP11.21□□□□□ -0.61
VPS16-206ENST00000466415 SLC22A8Q8TCC7 542 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 OMA1Q96E52 524 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 IP6K3Q96PC2 410 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 BDH2Q9BUT1 245 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 HOXD1Q9GZZ0 328 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 SAP130Q9H0E3 1048 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 SEMA6AQ9H2E6 1030 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 MMP25Q9NPA2 562 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 IL1RAPQ9NPH3 570 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 FBXO34Q9NWN3 711 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 RIMS3Q9UJD0 308 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 FBXL4Q9UKA2 621 aa11.21□□□□□ -0.61
VPS16-206ENST00000466415 FAM32AQ9Y421 112 aaKnown RBP11.21□□□□□ -0.61
VPS16-206ENST00000466415 MRPS18BQ9Y676 258 aaKnown RBP11.21□□□□□ -0.61
VPS16-206ENST00000466415 A0A1W2PQ72 361 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 AGAP5A6NIR3 686 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 WWP2O00308 870 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 SCDO00767 359 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 TERTO14746 1132 aaKnown RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 CLOCKO15516 846 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 E2F6O75461 281 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 NID1P14543 1247 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 RPS4Y1P22090 263 aaKnown RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 F8A1P23610 371 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 LCN1P31025 176 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 MAGEA2P43356 314 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 OR1E2P47887 323 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 TMED10P49755 219 aaKnown RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 ATP12AP54707 1039 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 RGS8P57771 180 aaPredicted RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 VLDLRP98155 873 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 IL10RAQ13651 578 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 GRAMD1BQ3KR37 738 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 PDZK1Q5T2W1 519 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 DEF8Q6ZN54 512 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 ZAR1Q86SH2 424 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 AMIGO2Q86SJ2 522 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 DTX1Q86Y01 620 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 LILRA2Q8N149 483 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 ZNF441Q8N8Z8 693 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 CATSPER1Q8NEC5 780 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 GPR32P1Q8NGA4 272 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 ELP5Q8TE02 316 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 DIO2Q92813 273 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 SDCCAG3Q96C92 435 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 CENPNQ96H22 339 aaPredicted RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 IMMP1LQ96LU5 166 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 LMF1Q96S06 567 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 ZNF347Q96SE7 839 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 VCXQ9H320 206 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 LIN28AQ9H9Z2 209 aaKnown RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 AGPAT4Q9NRZ5 378 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 P4HTMQ9NXG6 502 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 DNAJB9Q9UBS3 223 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 CUL9Q8IWT3 2517 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 EP300Q09472 2414 aaPredicted RBP11.2□□□□□ -0.62
VPS16-206ENST00000466415 SDK2Q58EX2 2172 aa11.2□□□□□ -0.62
VPS16-206ENST00000466415 SAC3D1A6NKF1 404 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 M0R3H8 397 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 AP3D1O14617 1153 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 UGT2B17O75795 530 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 UTS2O95399 124 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 LGI1O95970 557 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 LIFP15018 202 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 ABCD3P28288 659 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 IFNA8P32881 189 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 VHLP40337 213 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 PTDSS1P48651 473 aaKnown RBP11.19□□□□□ -0.62
VPS16-206ENST00000466415 SPIBQ01892 262 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 CAMK2BQ13554 666 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms