RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 HDHD2Q9H0R4 259 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 KCNN2Q9H2S1 579 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 MARK1Q9P0L2 795 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 NCKAP1Q9Y2A7 1128 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 PCYT1BQ9Y5K3 369 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 C7orf66A4D0T2 115 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 H7BY64 318 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 KPNA3O00505 521 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 MAN2B1O00754 1011 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 DVL2O14641 736 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 FABP7O15540 132 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 KLF4O43474 513 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 LANCL1O43813 399 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 VEGFDO43915 354 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 CH25HO95992 272 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 PAHP00439 452 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 TFPIP10646 304 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 RFX3P48380 749 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 RNF144AP50876 292 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 METAP1P53582 386 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 HTRA4P83105 476 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 ST3GAL3Q11203 375 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 IKZF1Q13422 519 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 ANKRD54Q6NXT1 300 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 AMIGO1Q86WK6 493 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 KLBQ86Z14 1044 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 ZNF366Q8N895 744 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 BBS1Q8NFJ9 593 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 TFGQ92734 400 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 PRAP1Q96NZ9 151 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 TEX12Q9BXU0 123 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 PCBD2Q9H0N5 130 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 QRSL1Q9H0R6 528 aaKnown RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 TDP1Q9NUW8 608 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 RNF13O43567 381 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 NTN1O95631 604 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 HMGN2P05204 90 aaKnown RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 PSMB5P28074 263 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 NTSP30990 170 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 UQCRC1P31930 480 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 BTCP35070 178 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 CTNNB1P35222 781 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 HSD17B2P37059 387 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 LASP1Q14847 261 aaKnown RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 PGGHGQ32M88 737 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 FAM46CQ5VWP2 391 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 FAM205BPQ63HN1 556 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 LILRA6Q6PI73 481 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 BHLHB9Q6PI77 547 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 SMARCD3Q6STE5 483 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 OR5K2Q8NHB8 316 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 RFT1Q96AA3 541 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 KCTD12Q96CX2 325 aaKnown RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 YIPF4Q9BSR8 244 aa14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 THAP7Q9BT49 309 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 ELF5Q9UKW6 265 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 GPR55Q9Y2T6 319 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-202ENST00000439510 MYO10Q9HD67 2058 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 ZSCAN5BA6NJL1 495 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 RBMS1P29558 406 aaKnown RBP14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 IFNA8P32881 189 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 PRKAG1P54619 331 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 FCN2Q15485 313 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 ZNF311Q5JNZ3 666 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 IDNKQ5T6J7 187 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 SCMH1Q96GD3 660 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.27□□□□□ -0.121e-6■□□□□ 11
CDC42EP4-202ENST00000439510 IMP3Q9NV31 184 aaKnown RBP14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 AUP1Q9Y679 476 aa14.27□□□□□ -0.12
CDC42EP4-202ENST00000439510 LOC105371267A0A1B0GV96 52 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 A0A1W2PPV9 198 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 CPSF4LA6NMK7 179 aaKnown RBP14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 C6P13671 934 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 ENPP1P22413 925 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 THBS2P35442 1172 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 PER3P56645 1201 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 DECR1Q16698 335 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 PIP5KL1Q5T9C9 394 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 WASH2PQ6VEQ5 465 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 ZNF620Q6ZNG0 422 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 RRM2BQ7LG56 351 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 OAFQ86UD1 273 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 SIRT6Q8N6T7 355 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 ACOT11Q8WXI4 607 aaPredicted RBP14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 HERVK_113Q902F9 699 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 AICDAQ9GZX7 198 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 MED28Q9H204 178 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 SLC38A1Q9H2H9 487 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 GHITMQ9H3K2 345 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 EMC7Q9NPA0 242 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 TNFRSF10DQ9UBN6 386 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 CHST2Q9Y4C5 530 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 KCNE3Q9Y6H6 103 aa14.27□□□□□ -0.13
CDC42EP4-202ENST00000439510 LINC00862A6NCI5 91 aa14.26□□□□□ -0.13
CDC42EP4-202ENST00000439510 OR1F1O43749 312 aa14.26□□□□□ -0.13
CDC42EP4-202ENST00000439510 TRHRP34981 398 aaPredicted RBP14.26□□□□□ -0.13
CDC42EP4-202ENST00000439510 ARFIP1P53367 373 aa14.26□□□□□ -0.13
CDC42EP4-202ENST00000439510 SHC2P98077 582 aa14.26□□□□□ -0.13
CDC42EP4-202ENST00000439510 CCDC85BQ15834 202 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms