RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CYP4Z2PQ8N1L4 340 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 METTL25Q8N6Q8 603 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 THTPAQ9BU02 230 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 RUBCNLQ9H714 662 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 POLE3Q9NRF9 147 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 MKLN1Q9UL63 735 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 ANGPT4Q9Y264 503 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 NBEAQ8NFP9 2946 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 ELOVL7A1L3X0 281 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 PRORSD1PA6NEY8 169 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 TP53I11O14683 189 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 PCGF2P35227 344 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 ARG2P78540 354 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 CHRNEQ04844 493 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 GPR68Q15743 365 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 ZSCAN26Q16670 478 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 LINC00303Q3SY05 128 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 FLYWCH1Q4VC44 716 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 RPS26P11Q5JNZ5 115 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 TYW3Q6IPR3 259 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 REEP3Q6NUK4 255 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 IGFL2Q6UWQ7 119 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 FRRS1Q6ZNA5 592 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 ARHGAP24Q8N264 748 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 HIPK4Q8NE63 616 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 OR10G3Q8NGC4 313 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 HGDQ93099 445 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 RNF32Q9H0A6 362 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 SLC38A1Q9H2H9 487 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 LRFN1Q9P244 771 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 CD300AQ9UGN4 299 aa21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 TNRC6AQ8NDV7 1962 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-203ENST00000397397 NPIPA5A0A0B4J1W7 369 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 OR5H15A6NDH6 313 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 NPIPA7E9PJI5 369 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 DNAJC8O75937 253 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 UTS2O95399 124 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 ZIC2O95409 532 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 NPIPA8P0DM63 369 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 TCN1P20061 433 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 LCN1P31025 176 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 CEACAM7Q14002 265 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 RTL4Q6ZR62 310 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 SLC30A8Q8IWU4 369 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 ZNF619Q8N2I2 560 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 BBS10Q8TAM1 723 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 HAS2Q92819 552 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 TMCO6Q96DC7 493 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 TREX2Q9BQ50 279 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 LRMDAQ9H2I8 198 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 TRIM45Q9H8W5 580 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 FLRT3Q9NZU0 649 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 ZNF451Q9Y4E5 1061 aa21.69■■□□□ 1.06
TSPAN4-203ENST00000397397 A0A0G2JPF8 293 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 HNRNPCL2B2RXH8 293 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 HNRNPCL3B7ZW38 293 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 ICOSLGO75144 302 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 GUSBP08236 651 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 HNRNPCL4P0DMR1 293 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 HSD17B1P14061 328 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 OR1C1Q15619 314 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 GRAMD1BQ3KR37 738 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 SPATS1Q496A3 300 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 PRAMEF8Q5VWM4 474 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 PRAMEF7Q5VXH5 474 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 FAM156AQ8NDB6 213 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 TNIP2Q8NFZ5 429 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 TM9SF4Q92544 642 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 TTC9Q92623 222 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 ABHD17AQ96GS6 310 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 CLPTM1LQ96KA5 538 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 SGCZQ96LD1 299 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 NODALQ96S42 347 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 SAP130Q9H0E3 1048 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 PCDHGB7Q9Y5F8 929 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 CHD6Q8TD26 2715 aa21.68■■□□□ 1.06
TSPAN4-203ENST00000397397 GSTA4O15217 222 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 GSC2O15499 205 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 KIAA0513O60268 411 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 PDE5AO76074 875 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 PGM3O95394 542 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 AQP1P29972 269 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 PGM1P36871 562 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 DCTP40126 519 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 RPP38P78345 283 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 RHDQ02161 417 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 KCNAB2Q13303 367 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 SPINK14Q6IE38 97 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 YTHDF3Q7Z739 585 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 SPPL2AQ8TCT8 520 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 MCUR1Q96AQ8 359 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 SIGLEC12Q96PQ1 595 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 CADM1Q9BY67 442 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 HOXD1Q9GZZ0 328 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.67■■□□□ 1.062e-7■■■■■ 28.9
TSPAN4-203ENST00000397397 MTHFD2LQ9H903 347 aaPredicted RBP21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 BCL2L10Q9HD36 194 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 PCDHGA10Q9Y5H3 936 aa21.67■■□□□ 1.06
TSPAN4-203ENST00000397397 NEURL1O76050 574 aa21.66■■□□□ 1.06
TSPAN4-203ENST00000397397 FAM87AP0C7U9 286 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms