RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF28P17035 718 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 HOXA9P31269 272 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 DCAF7P61962 342 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 DNASE1L3Q13609 305 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 RPE65Q16518 533 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 LAS2Q8IYD9 372 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 KLHL15Q96M94 604 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF471Q9BX82 626 aaPredicted RBP17.89■□□□□ 0.45
PTPRE-201ENST00000254667 GSKIPQ9P0R6 139 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.89■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF534Q76KX8 674 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 FUNDC2Q9BWH2 189 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 FAM227AF5H4B4 570 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 ERVFC1P60507 584 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 NXPE3Q969Y0 559 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 DNAJA3Q96EY1 480 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 CCDC32Q9BV29 185 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 DPH1Q9BZG8 443 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 NWD2Q9ULI1 1742 aa17.89■□□□□ 0.45
PTPRE-201ENST00000254667 TRAV6A0A075B6T7 132 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 ABLIM3O94929 683 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 AMY2BP19961 511 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 MELKQ14680 651 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 OR5AK2Q8NH90 309 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 SLC6A5Q9Y345 797 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 DDX60Q8IY21 1712 aaKnown RBP17.88■□□□□ 0.45
PTPRE-201ENST00000254667 A0A1W2PPK0 400 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 DIRAS3O95661 229 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 TNFRSF1BP20333 461 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 PRAMEF8Q5VWM4 474 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 PRAMEF7Q5VXH5 474 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 MFSD9Q8NBP5 474 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 IL37Q9NZH6 218 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 TAAR2Q9P1P5 351 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 ERVK-19Q9WJR5 959 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 RNF215Q9Y6U7 377 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 CSF2P04141 144 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 FUT1P19526 365 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 RAB12Q6IQ22 244 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 SPTSSAQ969W0 71 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 UBXN10Q96LJ8 280 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 MYADMQ96S97 322 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 HDAC8Q9BY41 377 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 GGT3PA6NGU5 568 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 A6NLC8 198 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 CACNG3O60359 315 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 GPR75O95800 540 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 GNRHRP30968 328 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 FAM180BQ6P0A1 224 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 LIX1LQ8IVB5 337 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 OR9Q2Q8NGE9 314 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 FRS2Q8WU20 508 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 UBTD2Q8WUN7 234 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 SFXN2Q96NB2 322 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 SLC30A3Q99726 388 aa17.88■□□□□ 0.45
PTPRE-201ENST00000254667 LSM1O15116 133 aaKnown RBP17.87■□□□□ 0.45
PTPRE-201ENST00000254667 WNT4P56705 351 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 TMEM184AQ6ZMB5 413 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 SLC35F2Q8IXU6 374 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 PAPD5Q8NDF8 572 aaKnown RBP17.87■□□□□ 0.45
PTPRE-201ENST00000254667 BTBD2Q9BX70 525 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 HDHD5Q9BXW7 423 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 FCER2P06734 321 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 LRRC69Q6ZNQ3 347 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 ADGRG5Q8IZF4 528 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 LINC01465Q8N7H1 131 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 ADAMTS16Q8TE57 1224 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 TCTN2Q96GX1 697 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 UHRF1Q96T88 793 aaPredicted RBP17.87■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF350Q9GZX5 532 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 H7C417 338 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 ADAMTSL4Q6UY14 1074 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF704Q6ZNC4 412 aaPredicted RBP17.87■□□□□ 0.45
PTPRE-201ENST00000254667 METTL4Q8N3J2 472 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 OR52R1Q8NGF1 315 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 HLA-CQ95604 372 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 SORBS1Q9BX66 1292 aaKnown RBP17.87■□□□□ 0.45
PTPRE-201ENST00000254667 MYH10P35580 1976 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 HHLA1C9JL84 531 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 H0YIV9 168 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 DNAJB6O75190 326 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 CPMP14384 443 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 LRIT1Q9P2V4 623 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 GPR52Q9Y2T5 361 aa17.87■□□□□ 0.45
PTPRE-201ENST00000254667 TRIM64A6NGJ6 449 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 IST1P53990 364 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 ACTBP60709 375 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 ACTG1P63261 375 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 SNTB2Q13425 540 aaKnown RBP17.86■□□□□ 0.45
PTPRE-201ENST00000254667 CDNFQ49AH0 187 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 SPRYD4Q8WW59 207 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-201ENST00000254667 ACOT11Q8WXI4 607 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-201ENST00000254667 NECAB3Q96P71 396 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-201ENST00000254667 INSM2Q96T92 566 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-201ENST00000254667 MRI1Q9BV20 369 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 EPHX3Q9H6B9 360 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 PRSS16Q9NQE7 514 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 KCMF1Q9P0J7 381 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 BORCS7-ASMTA0A0B4J1R7 106 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 M0R129 80 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms