RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 WBP1Q96G27 269 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 TSNARE1Q96NA8 513 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 CCDC115Q96NT0 180 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 MCEEQ96PE7 176 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 NEDD4LQ96PU5 975 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 BBS4Q96RK4 519 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 MRPL57Q9BQC6 102 aaKnown RBP3.38□□□□□ -1.87
DDX42-205ENST00000577978 SLC30A2Q9BRI3 323 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 ZNF416Q9BWM5 594 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 SLC19A3Q9BZV2 496 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 SRRQ9GZT4 340 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 RNF121Q9H920 327 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 CYP3A43Q9HB55 503 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 VAT1LQ9HCJ6 419 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 KRCC1Q9NPI7 259 aaPredicted RBP3.38□□□□□ -1.87
DDX42-205ENST00000577978 SLC52A3Q9NQ40 469 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 PCDHB16Q9NRJ7 776 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 RGS18Q9NS28 235 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 PLCXD1Q9NUJ7 323 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 COA4Q9NYJ1 87 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 MAP3K20Q9NYL2 800 aaKnown RBP3.38□□□□□ -1.87
DDX42-205ENST00000577978 MDFICQ9P1T7 246 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 DNAJB9Q9UBS3 223 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 FBXO40Q9UH90 709 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 NUFIP1Q9UHK0 495 aaKnown RBP3.38□□□□□ -1.87
DDX42-205ENST00000577978 KIF25Q9UIL4 384 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 FBXO4Q9UKT5 387 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 RAB23Q9ULC3 237 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 STUB1Q9UNE7 303 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 SNX6Q9UNH7 406 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 LIPT1Q9Y234 373 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 RNF6Q9Y252 685 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 TNFSF13BQ9Y275 285 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 TMEM5Q9Y2B1 443 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 KLK4Q9Y5K2 254 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 GMPPBQ9Y5P6 360 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 U3KQ87 197 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 MYO10Q9HD67 2058 aa3.38□□□□□ -1.87
DDX42-205ENST00000577978 RALGAPA1Q6GYQ0 2036 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 MICAL3Q7RTP6 2002 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 F8P00451 2351 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 GREB1Q4ZG55 1949 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 CSMD1Q96PZ7 3565 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 IGLV3-22A0A075B6J6 115 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 TRAV6A0A075B6T7 132 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 A0A0B4J293 547 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 CCDC182A6NF36 153 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 MPTX1A8MV57 137 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 E5RI56 91 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 FAM86B1E9PN63 330 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 G3V2T6 193 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 SNAP23O00161 211 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 PRMT5O14744 637 aaPredicted RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 TSPAN4O14817 238 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 INPP4BO15327 924 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 KCNN4O15554 427 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 SSX4O60224 188 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 HCN1O60741 890 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 SEC22BO75396 215 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 VPS26AO75436 327 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 EEDO75530 441 aaKnown RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 SCO1O75880 301 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 NDUFB10O96000 172 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 IFNA7P01567 189 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 MT-ND2P03891 347 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 RAF1P04049 648 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 POLBP06746 335 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 APRTP07741 180 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 ACAA1P09110 424 aaPredicted RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 FAM86B2P0C5J1 330 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 HLA-EP13747 358 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 NCF1P14598 390 aaPredicted RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 CTPS1P17812 591 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 MSH3P20585 1137 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 PTBP1P26599 531 aaKnown RBP eCLIP3.37□□□□□ -1.875e-11■■■■■ 48.5
DDX42-205ENST00000577978 PSMB9P28065 219 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 HOXA11P31270 313 aaPredicted RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 GYG1P46976 350 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 ATP5OP48047 213 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 NOVA1P51513 510 aaKnown RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 CLCNKAP51800 687 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 TKTL1P51854 596 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 CLDN20P56880 219 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 DSCR9P59020 149 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 RPL15P61313 204 aaKnown RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 DYNLT1P63172 113 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 DEFB103AP81534 67 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 EMX2Q04743 252 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 RELQ04864 619 aaPredicted RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 PMPCAQ10713 525 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 BAK1Q16611 211 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 KYAT1Q16773 422 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 PPP1R3AQ16821 1122 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 DUSP6Q16828 381 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 MPEG1Q2M385 716 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 TIMM50Q3ZCQ8 353 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 FAM98BQ52LJ0 330 aaKnown RBP3.37□□□□□ -1.87
DDX42-205ENST00000577978 KLHL12Q53G59 568 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 HSD17B12Q53GQ0 312 aa3.37□□□□□ -1.87
DDX42-205ENST00000577978 RUNDC3AQ59EK9 446 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms