RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 GPN1Q9HCN4 374 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 ABCC13Q9NSE7 274 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 UXTQ9UBK9 157 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 CHD7Q9P2D1 2997 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 GREB1Q4ZG55 1949 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 RANBP2P49792 3224 aaKnown RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 IGHV4-30-2A0A087WSY4 118 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 TRAV34A0A0B4J273 112 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 YJEFN3A6XGL0 299 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 HIDE1A8MVS5 230 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 E7ENQ6 273 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 SPOPO43791 374 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 GOSR1O95249 250 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 FGF19O95750 216 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 MT-ND3P03897 115 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 KRT7P08729 469 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ZDHHC11BP0C7U3 371 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 RALAP11233 206 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 TCP1P17987 556 aaKnown RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ATF6P18850 670 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 EEF1B2P24534 225 aaKnown RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PTAFRP25105 342 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PSMA2P25787 234 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 CTNNA2P26232 953 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 HOXA9P31269 272 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 SDC4P31431 198 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PCK1P35558 622 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 CETN2P41208 172 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 CLCN4P51793 760 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 LIMK1P53667 647 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 CSE1LP55060 971 aaKnown RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 CLDN15P56746 228 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 YWHAGP61981 247 aaKnown RBP eCLIP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 OGDHQ02218 1023 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 HADHQ16836 314 aaKnown RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ZNF674Q2M3X9 581 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 VWC2Q2TAL6 325 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 SMU1Q2TAY7 513 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 SLC25A52Q3SY17 297 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 CCDC14Q49A88 953 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 BOLA3Q53S33 107 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PLPP4Q5VZY2 271 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 IL17RELQ6ZVW7 336 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ERN2Q76MJ5 926 aaKnown RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 STRADAQ7RTN6 431 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 NT5DC3Q86UY8 548 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 DEFB106AQ8N104 65 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ABHD12Q8N2K0 398 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ELMOD1Q8N336 334 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ARL6IP6Q8N6S5 226 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 UBL4BQ8N7F7 174 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 OR4D10Q8NGI6 311 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PSMA8Q8TAA3 256 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 JOSD2Q8TAC2 188 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 GRK7Q8WTQ7 553 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 RNF139Q8WU17 664 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 TEKT4Q8WW24 435 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ARNTL2Q8WYA1 636 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PIK3R3Q92569 461 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 FBXO32Q969P5 355 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PSMG2Q969U7 264 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 HDAC11Q96DB2 347 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 MRPL38Q96DV4 380 aaKnown RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ATXN7L3BQ96GX2 97 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 NPY6RQ99463 290 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 CDCA3Q99618 268 aaPredicted RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 MMADHCQ9H3L0 296 aaPredicted RBP4.41□□□□□ -1.7
CCDC39-202ENST00000471307 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 EPS15L1Q9UBC2 864 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 RNF14Q9UBS8 474 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 STAP1Q9ULZ2 295 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 ZNF510Q9Y2H8 683 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 POMT1Q9Y6A1 747 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 SAR1BQ9Y6B6 198 aa4.41□□□□□ -1.7
CCDC39-202ENST00000471307 PATJQ8NI35 1801 aa4.4□□□□□ -1.7
CCDC39-202ENST00000471307 TRAV24A0A0B4J272 114 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 A0A0U1RQK1 487 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 A0A1W2PPK0 400 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF320A2RRD8 509 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF840PA6NDX5 716 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 SHISA7A6NL88 538 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 TMEM110-MUSTN1A8MSY1 372 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 K7EQD1 137 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 PSTPIP1O43586 416 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 PRPSAP2O60256 369 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 GRAP2O75791 330 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CSN3P07498 182 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 SLC2A3P11169 496 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 HMGA1P17096 107 aaKnown RBP4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CD22P20273 847 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 SSR1P43307 286 aaKnown RBP4.4□□□□□ -1.71
CCDC39-202ENST00000471307 ZFP36L2P47974 494 aaKnown RBP4.4□□□□□ -1.71
CCDC39-202ENST00000471307 RAB28P51157 221 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CCR3P51677 355 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 AIF1P55008 147 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 RWDD2BP57060 319 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms