RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PAGE2BQ5JRK9 111 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 MIER3Q7Z3K6 550 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 ADAMTSL2Q86TH1 951 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 CENPSQ8N2Z9 138 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 CADM2Q8N3J6 435 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 MAGEB18Q96M61 343 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 CARD6Q9BX69 1037 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 SIRPDQ9H106 197 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 C1orf21Q9H246 121 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 THAP9Q9H5L6 903 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 PDFQ9HBH1 243 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 DCAF13Q9NV06 445 aaKnown RBP4.19□□□□□ -1.74
PTCD3-205ENST00000464541 IGLV8-61A0A075B6I0 122 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 FBLL1A6NHQ2 334 aaKnown RBP4.18□□□□□ -1.74
PTCD3-205ENST00000464541 PRPSAP2O60256 369 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 SERF1AO75920 110 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 APBB3O95704 486 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 SDC1P18827 310 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 IGHV1-2P23083 117 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 DRD3P35462 400 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 POU3F4P49335 361 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 RAG2P55895 527 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 MYBPC1Q00872 1141 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 ANKDD1AQ495B1 522 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 HSP90AA5PQ58FG0 334 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 METTL11BQ5VVY1 283 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 PAQR9Q6ZVX9 377 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 TAF8Q7Z7C8 310 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 WDR36Q8NI36 951 aaKnown RBP4.18□□□□□ -1.74
PTCD3-205ENST00000464541 FBXO30Q8TB52 745 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 SPXQ9BT56 116 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 WRAP53Q9BUR4 548 aaKnown RBP4.18□□□□□ -1.74
PTCD3-205ENST00000464541 MIEF1Q9NQG6 463 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 FAM114A2Q9NRY5 505 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 KLRF1Q9NZS2 232 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 TMEM9Q9P0T7 183 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 IL19Q9UHD0 177 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 CTNNA3Q9UI47 895 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 STRAPQ9Y3F4 350 aaKnown RBP4.18□□□□□ -1.74
PTCD3-205ENST00000464541 FLVCR1Q9Y5Y0 555 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 AP1M2Q9Y6Q5 423 aa4.18□□□□□ -1.74
PTCD3-205ENST00000464541 ARHGAP42A6NI28 874 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 CDX4O14627 284 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-205ENST00000464541 SDC3O75056 442 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 PROS1P07225 676 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 AHCYP23526 432 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 PUDPQ08623 228 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 IL18R1Q13478 541 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 RAB35Q15286 201 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 CYBRD1Q53TN4 286 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 TOR1AIP1Q5JTV8 583 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 LIPKQ5VXJ0 399 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 KDELC1Q6UW63 502 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 P4HA3Q7Z4N8 544 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 RABEPKQ7Z6M1 372 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 FBXO16Q8IX29 292 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-205ENST00000464541 CCNYQ8ND76 341 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 TRIM44Q96DX7 344 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-205ENST00000464541 SPATA13Q96N96 652 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 ATG10Q9H0Y0 220 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 ELOVL2Q9NXB9 296 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 IL17CQ9P0M4 197 aa4.17□□□□□ -1.74
PTCD3-205ENST00000464541 SPAG9O60271 1321 aaKnown RBP4.17□□□□□ -1.74
PTCD3-205ENST00000464541 RNF103-CHMP3A0A140T963 221 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 A0A1W2PNU3 283 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-205ENST00000464541 SYCE3A1L190 88 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 H0Y9J4 135 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 NDUFA7O95182 113 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 IL2RGP31785 369 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 RFC2P35250 354 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 ACVR1BP36896 505 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 SRYQ05066 204 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 ZP4Q12836 540 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 NET1Q7Z628 596 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-205ENST00000464541 GPR65Q8IYL9 337 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 TBC1D21Q8IYX1 336 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 LINC01006Q8NI28 216 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 SYAP1Q96A49 352 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-205ENST00000464541 VPS39Q96JC1 886 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 TMEM237Q96Q45 408 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 RUFY1Q96T51 708 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 ASB8Q9H765 288 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 EHFQ9NZC4 300 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 SLC2A6Q9UGQ3 507 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 CA5BQ9Y2D0 317 aa4.16□□□□□ -1.74
PTCD3-205ENST00000464541 KLF2Q9Y5W3 355 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-205ENST00000464541 TNRQ92752 1358 aa4.15□□□□□ -1.74
PTCD3-205ENST00000464541 ZFP92A6NM28 416 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 E9PMD0 336 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 SGK494L7N484 410 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 HEXBP07686 556 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 CASQ1P31415 396 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 EMDP50402 254 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 MRPL28Q13084 256 aaKnown RBP4.15□□□□□ -1.75
PTCD3-205ENST00000464541 TMED1Q13445 227 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 SNX1Q13596 522 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 BEND6Q5SZJ8 279 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-205ENST00000464541 PPP1R42Q7Z4L9 355 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 ADGRD2Q7Z7M1 963 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 PARGQ86W56 976 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms