RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 DEFA4P12838 97 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 RAB13P51153 203 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 IDH3GP51553 393 aaPredicted RBP10.63□□□□□ -0.71
SCN4A-201ENST00000435607 JAM2P57087 298 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 ATG9BQ674R7 924 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 BANPQ8N9N5 519 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 FRZBQ92765 325 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 TSNAXQ99598 290 aaKnown RBP10.63□□□□□ -0.71
SCN4A-201ENST00000435607 MYH7P12883 1935 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 PDLIM3Q53GG5 364 aaPredicted RBP10.63□□□□□ -0.71
SCN4A-201ENST00000435607 Q6ZSR6 202 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 PIAS4Q8N2W9 510 aaPredicted RBP10.63□□□□□ -0.71
SCN4A-201ENST00000435607 OR5D14Q8NGL3 314 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 KCNE4Q8WWG9 221 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 MRI1Q9BV20 369 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 SEMA6CQ9H3T2 930 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 MAS1P04201 325 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 ITGB2P05107 769 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 CRYBA1P05813 215 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 H2AFB2P0C5Z0 115 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 CD34P28906 385 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 CAV2P51636 162 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 RAB5BP61020 215 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 SF3A2Q15428 464 aaKnown RBP10.63□□□□□ -0.71
SCN4A-201ENST00000435607 CCDC58Q4VC31 144 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 CRTC1Q6UUV9 634 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 RTL10Q7L3V2 364 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 KLHDC8AQ8IYD2 350 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 PSMF1Q92530 271 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 BSCL2Q96G97 398 aaPredicted RBP10.63□□□□□ -0.71
SCN4A-201ENST00000435607 HHIPQ96QV1 700 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 FUCA2Q9BTY2 467 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 MTG2Q9H4K7 406 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 RHCGQ9UBD6 479 aa10.63□□□□□ -0.71
SCN4A-201ENST00000435607 C17orf105B2RV13 164 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 EEF1E1-BLOC1S5C9J1V9 151 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 E9PI62 339 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 EEF1E1O43324 174 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 MRPL33O75394 65 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 GSTP1P09211 210 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 PTNP21246 168 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 GPR176Q14439 515 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 PAN3Q58A45 887 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 SKA3Q8IX90 412 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 RBMXL3Q8N7X1 1067 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 ASCC1Q8N9N2 400 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 ERVK13-1Q9NX77 482 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 HMX3A6NHT5 357 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 ACVR1BP36896 505 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 GSK3BP49841 420 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 EIF2B1Q14232 305 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 GOT1L1Q8NHS2 421 aaPredicted RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 GPR22Q99680 433 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 PCDHAC1Q9H158 963 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 JRKO75564 520 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 F2P00734 622 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 TWSG1Q9GZX9 223 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 MYH6P13533 1939 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 FEZF1A0PJY2 475 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 PIGRP01833 764 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 TAS2R30P59541 319 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 DNAJB13P59910 316 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 QPCTQ16769 361 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 UGT8Q16880 541 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF404Q494X3 552 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 TLDC1Q6P9B6 456 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 B3GNT3Q9Y2A9 372 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 BCL9LQ86UU0 1499 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 CACNA1FO60840 1977 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 PMM2O15305 246 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 CD6P30203 668 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 PYCR1P32322 319 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 HES1Q14469 280 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 ZBED5Q49AG3 693 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 OR8J3Q8NGG0 315 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 NPLOC4Q8TAT6 608 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 SIT1Q9Y3P8 196 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 KLRC4-KLRK1H3BQV0 150 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 TP53P04637 393 aaPredicted RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 SNCAP37840 140 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 ATP4BP51164 291 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 ATP1B3P54709 279 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 TRMT10BQ6PF06 316 aaKnown RBP10.62□□□□□ -0.71
SCN4A-201ENST00000435607 CDHR3Q6ZTQ4 885 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 PM20D2Q8IYS1 436 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 MS4A4EQ96PG1 132 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 EVA1AQ9H8M9 152 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 DNAJB4Q9UDY4 337 aa10.62□□□□□ -0.71
SCN4A-201ENST00000435607 A0A0U1RQK1 487 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 TRAPPC13A5PLN9 417 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 HOXC8P31273 242 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF45Q02386 682 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 KIR2DS3Q14952 304 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 ACSM3Q53FZ2 586 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 CFAP77Q6ZQR2 320 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 C2CD4AQ8NCU7 369 aaPredicted RBP10.61□□□□□ -0.71
SCN4A-201ENST00000435607 CMASQ8NFW8 434 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms