RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 FLYWCH1Q4VC44 716 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 C6orf132Q5T0Z8 1188 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 FAM111BQ6SJ93 734 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 USP53Q70EK8 1073 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 CLDN22Q8N7P3 220 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 SLC16A11Q8NCK7 471 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 SLC9A6Q92581 669 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 OR2A14Q96R47 310 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 NELL2Q99435 816 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 MCHR1Q99705 422 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 MED18Q9BUE0 208 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 C6orf106Q9H6K1 298 aaPredicted RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 MED17Q9NVC6 651 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 IL20Q9NYY1 176 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 PTGFRNQ9P2B2 879 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 NCKAP1Q9Y2A7 1128 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 A6NCN8 305 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 URADA6NGE7 173 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 LINC01565O15544 149 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 FRS3O43559 492 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 TMED10P49755 219 aaKnown RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 CLDN2P57739 230 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 RGS8P57771 180 aaPredicted RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 RUNX1T1Q06455 604 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 PUS10Q3MIT2 529 aaKnown RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 GDPD3Q7L5L3 318 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 LAPTM4BQ86VI4 370 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 SETD6Q8TBK2 473 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 SLC25A46Q96AG3 418 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 FAM46AQ96IP4 442 aaKnown RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 FCRL4Q96PJ5 515 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 TEX12Q9BXU0 123 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 CNIH4Q9P003 139 aa13.98□□□□□ -0.17
SCFD2-201ENST00000388940 ZNF443Q9Y2A4 671 aaPredicted RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 CAB39Q9Y376 341 aaPredicted RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 SF3B6Q9Y3B4 125 aaKnown RBP13.98□□□□□ -0.17
SCFD2-201ENST00000388940 TNFRSF10CO14798 259 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 SPNP16150 400 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 TLX1P31314 330 aaPredicted RBP13.97□□□□□ -0.17
SCFD2-201ENST00000388940 AVPR1BP47901 424 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 ARPC4P59998 168 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 PSPHP78330 225 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 RUNX2Q13950 521 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 LARS2Q15031 903 aaKnown RBP13.97□□□□□ -0.17
SCFD2-201ENST00000388940 TYW3Q6IPR3 259 aaKnown RBP13.97□□□□□ -0.17
SCFD2-201ENST00000388940 PLEKHM3Q6ZWE6 761 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 MBOAT2Q6ZWT7 520 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 GDF7Q7Z4P5 450 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 NKAIN4Q8IVV8 208 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 PEX5LQ8IYB4 626 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 POGLUT1Q8NBL1 392 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 ASB15Q8WXK1 588 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 CDS1Q92903 461 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 RFKQ969G6 155 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 SIPA1Q96FS4 1042 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 SLC41A3Q96GZ6 507 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 PBX4Q9BYU1 374 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 SNTG1Q9NSN8 517 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 NLGN3Q9NZ94 848 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 PILRAQ9UKJ1 303 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 DAPP1Q9UN19 280 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 CARD8Q9Y2G2 431 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 SPIN1Q9Y657 262 aaPredicted RBP13.97□□□□□ -0.17
SCFD2-201ENST00000388940 TRANK1O15050 2925 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 LAMA3Q16787 3333 aa13.97□□□□□ -0.17
SCFD2-201ENST00000388940 SNPHO15079 494 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 B3GALT2O43825 422 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 KLF8O95600 359 aaPredicted RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 APOA1P02647 267 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 THY1P04216 161 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 THBS1P07996 1170 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 TSPAN19P0C672 248 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 PBX2P40425 430 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 DUSP8Q13202 625 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 EXOSC6Q5RKV6 272 aaKnown RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 AADACL4Q5VUY2 407 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 DESI1Q6ICB0 168 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 CCBE1Q6UXH8 406 aaPredicted RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 ZNF485Q8NCK3 441 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 BMFQ96LC9 184 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 ARHGAP9Q9BRR9 750 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 CACYBPQ9HB71 228 aaKnown RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 SLC22A7Q9Y694 548 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 V9GYH0 126 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 SURF4O15260 269 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 CDRT1O95170 752 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 EIF2S1P05198 315 aaKnown RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 LIMS3P0CW19 117 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 LIMS4P0CW20 117 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 UGT2B7P16662 529 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 MAGP20916 626 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 ZNF10P21506 573 aaPredicted RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 ACTR1BP42025 376 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 ACTR1AP61163 376 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 SNRPNP63162 240 aaKnown RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 MLLT1Q03111 559 aaPredicted RBP13.96□□□□□ -0.17
SCFD2-201ENST00000388940 HYAL1Q12794 435 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 MAP4K2Q12851 820 aa13.96□□□□□ -0.17
SCFD2-201ENST00000388940 SELENBP1Q13228 472 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms