RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 CDRT1O95170 752 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 ATE1O95260 518 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 HK1P19367 917 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 WDR4P57081 412 aaKnown RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 HTRA4P83105 476 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 SLC14A1Q13336 389 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 BTN1A1Q13410 526 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 PNCKQ6P2M8 343 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 AGTRAPQ6RW13 159 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 FAM198BQ6UWH4 519 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 LARP4Q71RC2 724 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP3-201ENST00000268049 TMPRSS12Q86WS5 348 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 OR52J3Q8NH60 311 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 MFSD3Q96ES6 412 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 EBF4Q9BQW3 602 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 HSD3B7Q9H2F3 369 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 FN3KQ9H479 309 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 AMBNQ9NP70 447 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 C11orf16Q9NQ32 467 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 ENAMQ9NRM1 1142 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 DNAJB11Q9UBS4 358 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 SLC5A6Q9Y289 635 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 A0A1W2PPL8 197 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 F8W036 122 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 HCN1O60741 890 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 TOXO94900 526 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 IFNW1P05000 195 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 IL1R2P27930 398 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 AQP1P29972 269 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 SLC6A8P48029 635 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 NKX6-1P78426 367 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 BLOC1S1P78537 153 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 DNAJC5GQ8N7S2 189 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 C11orf65Q8NCR3 313 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 OR2L3Q8NG85 312 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 THRSPQ92748 146 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 FOLH1BQ9HBA9 442 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 PAK1IP1Q9NWT1 392 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 OR6C2Q9NZP2 312 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 MANBAO00462 879 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 ENTPD6O75354 484 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 FAM155BO75949 473 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 ABLIM3O94929 683 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 CSN2P05814 226 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 C2P06681 752 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 TACSTD2P09758 323 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 NKX3-2P78367 333 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 ZNF529Q6P280 563 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 S100A7AQ86SG5 101 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 OR1J4Q8NGS1 313 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 FCRL3Q96P31 734 aaPredicted RBP7.4□□□□□ -1.22
USP3-201ENST00000268049 HCAR1Q9BXC0 346 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 PITHD1Q9GZP4 211 aaPredicted RBP7.4□□□□□ -1.22
USP3-201ENST00000268049 GNG8Q9UK08 70 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 CNTN6Q9UQ52 1028 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 A0A0D9SEW6 157 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 F5H0A9 414 aaPredicted RBP7.4□□□□□ -1.22
USP3-201ENST00000268049 CXCR6O00574 342 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 OR1I1O60431 355 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 ITGB2P05107 769 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 THBS2P35442 1172 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 RAB5CP51148 216 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 GPR68Q15743 365 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 SPIN3Q5JUX0 258 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 COMTD1Q86VU5 262 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 GHDCQ8N2G8 530 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 OR2L5Q8NG80 312 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 OR52E4Q8NGH9 312 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 SLC2A12Q8TD20 617 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 PEX13Q92968 403 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 ZNF583Q96ND8 569 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 ZNF416Q9BWM5 594 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 BEX1Q9HBH7 125 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 PRSS16Q9NQE7 514 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 C1GALT1Q9NS00 363 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 UFSP2Q9NUQ7 469 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 KCNIP1Q9NZI2 227 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 SLCO3A1Q9UIG8 710 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 TMEM59LQ9UK28 342 aa7.4□□□□□ -1.22
USP3-201ENST00000268049 MYOCOSA0A1B0GUC4 107 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 C17orf113A0A1B0GUU1 675 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 LOC100130705A0A1B0GUX0 176 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 A0A1B0GVC2 190 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 hCG_2039718K7EN88 272 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 RNF13O43567 381 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 IL3RAP26951 378 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 ACVR2AP27037 513 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 PTPN6P29350 595 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 DSTNP60981 165 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 PCBD1P61457 104 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 CDK3Q00526 305 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 NFATC3Q12968 1075 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 MARCH9Q86YJ5 346 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 CHDHQ8NE62 594 aaPredicted RBP7.4□□□□□ -1.23
USP3-201ENST00000268049 RRNAD1Q96FB5 475 aaKnown RBP7.4□□□□□ -1.23
USP3-201ENST00000268049 COL21A1Q96P44 957 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 TSSK3Q96PN8 268 aa7.4□□□□□ -1.23
USP3-201ENST00000268049 CCDC32Q9BV29 185 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms