RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 AhrP30561 848 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Dusp2Q05922 318 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Emc10Q3TAS6 258 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Lsmem1Q3UQS2 128 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rnase12Q5GAM8 145 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc5a6Q5U4D8 634 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Bmp3Q8BHE5 468 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr772Q8VGC5 311 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PirQ9D711 290 aa15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Xrn2Q9DBR1 951 aaKnown RBP15.83■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ankrd31A0A140LI88 1765 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fam43bA2AM80 330 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Isg20l2Q3U1G5 368 aaKnown RBP15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc16a9Q7TM99 508 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rtn4ip1Q924D0 396 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rab3bQ9CZT8 219 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Scn1aA2APX8 2009 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tspan6O70401 245 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mbl2P41317 244 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gal3st2cQ3ULK5 396 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Znf574Q8BY46 900 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Blzf1Q8R2X8 403 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Imp4Q8VHZ7 291 aaKnown RBP15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fam136b-psA0A140T8T1 138 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Wnt6P22727 364 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Perm1Q149B8 807 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Hspb6Q5EBG6 162 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sema4cQ64151 834 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mfsd13aQ6PDE8 519 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 MINDY3Q9CV28 444 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gfod2Q9CYH5 385 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 IghdA0A0A6YW14 291 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1051Q7TR76 308 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Galnt12Q8BGT9 576 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pttg1ipQ8R143 174 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1033Q8VFK5 310 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn2r97K7N6Z2 861 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 RelbQ04863 558 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mtcp1Q60945 107 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 B3gnt5Q8BGY6 376 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 TipinQ91WA1 278 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Raver1Q9CW46 748 aaKnown RBP15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Idh3aQ9D6R2 366 aaKnown RBP15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Smg9Q9DB90 520 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rgs20Q9QZB1 239 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mtg2A2AFK4 405 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Skint4A7TZF3 474 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Skint2A7XUX6 400 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm2056J3QQ02 144 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 HexbP20060 536 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc35f1Q8BGK5 408 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nt5c1bQ91YE9 573 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Dio3Q91ZI8 304 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nipa2Q9JJC8 359 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 HmgclP38060 325 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Igfbp1P47876 272 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Lim2P56563 173 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Xkr5Q5GH66 676 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 1700001K19RikQ80ZT1 219 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ssxb2Q8C5Z3 165 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sirt3Q8R104 334 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pcdhb20Q91XZ9 799 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ndufb2Q9CPU2 105 aa15.82■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr221B2RVX8 311 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rpl10lP86048 214 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rsrp1Q3UC65 298 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PterQ60866 349 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PtprjQ64455 1238 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sumf2Q8BPG6 308 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PxkQ8BX57 582 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mgme1Q9CXC3 338 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ppil3Q9D6L8 161 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc23a1Q9Z2J0 605 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Lcn11A2BHR2 178 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pdlim3O70209 316 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cacng1O70578 223 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sec24aQ3U2P1 1090 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 MafaQ8CF90 359 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 2200002D01RikQ9D809 114 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 HrgQ9ESB3 525 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn2r115E9Q0E7 857 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Zfp619G3X9T2 1161 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Prrt1O35449 306 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 C130050O18RikQ497Y9 356 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 ArhgdigQ62160 225 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Casc3Q8K3W3 698 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rab7bQ8VEA8 199 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gpr45Q9EQQ4 373 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nme7Q9QXL8 395 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Asic5Q9R0Y1 495 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ralgapa1Q6GYP7 2035 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm8797A0A0A6YW67 77 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn2r105E9Q3A5 860 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Prdm14E9Q3T6 561 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm17728E9Q5K2 132 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ptpn20O55082 426 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 UbbP0CG49 305 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 UbcP0CG50 734 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rps27aP62983 156 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Uba52P62984 128 aa15.81■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms