RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 LIPT1Q9Y234 373 aa12.78□□□□□ -0.36
TMEM254-213ENST00000613758 PCDHGB3Q9Y5G1 929 aa12.78□□□□□ -0.36
TMEM254-213ENST00000613758 LOC101059948A0A1B0GTJ6 334 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 A8MVJ9 347 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 TERTO14746 1132 aaKnown RBP12.77□□□□□ -0.36
TMEM254-213ENST00000613758 PCDH17O14917 1159 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 DXOO77932 396 aaKnown RBP12.77□□□□□ -0.36
TMEM254-213ENST00000613758 NKX2-2O95096 273 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 MMP11P24347 488 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 PSG6Q00889 435 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 CHRNB3Q05901 458 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 FUT5Q11128 374 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 GNA13Q14344 377 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 SSPNQ14714 243 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 GPAT3Q53EU6 434 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 HEPHL1Q6MZM0 1159 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 C16orf62Q7Z3J2 963 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 GALNT10Q86SR1 603 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 EME1Q96AY2 570 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 SLC47A1Q96FL8 570 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 CIB1Q99828 191 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 FAM117AQ9C073 453 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 NTN4Q9HB63 628 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 CFL2Q9Y281 166 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 LRCH1Q9Y2L9 728 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.36
TMEM254-213ENST00000613758 ACOX3O15254 700 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 PRSS23O95084 383 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 PGM3O95394 542 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 F8A1P23610 371 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 CLCN2P51788 898 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 RTP5Q14D33 572 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 LRRC23Q53EV4 343 aaPredicted RBP12.77□□□□□ -0.37
TMEM254-213ENST00000613758 RPS26P11Q5JNZ5 115 aaPredicted RBP12.77□□□□□ -0.37
TMEM254-213ENST00000613758 CCDC80Q76M96 950 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 EID3Q8N140 333 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 GALNT4Q8N4A0 578 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 AMER2Q8N7J2 671 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 COX18Q8N8Q8 333 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 OR10Q1Q8NGQ4 319 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 PIK3R3Q92569 461 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 PYURFQ96I23 114 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 TRNT1Q96Q11 434 aaKnown RBP12.77□□□□□ -0.37
TMEM254-213ENST00000613758 ITPAQ9BY32 194 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 MAGIXQ9H6Y5 334 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 PPIEQ9UNP9 301 aaKnown RBP12.77□□□□□ -0.37
TMEM254-213ENST00000613758 ZNF451Q9Y4E5 1061 aa12.77□□□□□ -0.37
TMEM254-213ENST00000613758 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 GXYLT2A0PJZ3 443 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 C7orf72A4D263 438 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 TTC36A6NLP5 189 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 TMEM229AB2RXF0 380 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 M0QX08 132 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 SOCS2O14508 198 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CHRM4P08173 479 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 UQCRBP14927 111 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CRISP3P54108 245 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 PCBP3P57721 371 aaKnown RBP12.76□□□□□ -0.37
TMEM254-213ENST00000613758 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 ARHGAP11BQ3KRB8 267 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 PPP4R4Q6NUP7 873 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 KIRREL2Q6UWL6 708 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CBLL1Q75N03 491 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 OLIG3Q7RTU3 272 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 DTX1Q86Y01 620 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 IL22RA1Q8N6P7 574 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 BTBD9Q96Q07 612 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 BTBD2Q9BX70 525 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 ZNF700Q9H0M5 742 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 THSD1Q9NS62 852 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 GPR55Q9Y2T6 319 aaPredicted RBP12.76□□□□□ -0.37
TMEM254-213ENST00000613758 IGHV1-45A0A0A0MS14 117 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 C2orf92A0A1B0GVN3 265 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 SAC3D1A6NKF1 404 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 OR6C76A6NM76 312 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 SOCS6O14544 535 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CLOCKO15516 846 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 H6PDO95479 791 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 LDLRP01130 860 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 SEMG1P04279 462 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CT45A8P0DMV1 189 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CT45A9P0DMV2 189 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 OTX2P32243 289 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 PPICP45877 212 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 SLC26A5P58743 744 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 POU6F2P78424 691 aaPredicted RBP12.76□□□□□ -0.37
TMEM254-213ENST00000613758 FOXC1Q12948 553 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CT45A2Q5DJT8 189 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CRB2Q5IJ48 1285 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 NPSR1Q6W5P4 371 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 PATL1Q86TB9 770 aaKnown RBP12.76□□□□□ -0.37
TMEM254-213ENST00000613758 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 APCDD1LQ8NCL9 501 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 CHDHQ8NE62 594 aaPredicted RBP12.76□□□□□ -0.37
TMEM254-213ENST00000613758 SDF2Q99470 211 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 TREX2Q9BQ50 279 aaPredicted RBP12.76□□□□□ -0.37
TMEM254-213ENST00000613758 SEMA4CQ9C0C4 833 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 RUBCNLQ9H714 662 aa12.76□□□□□ -0.37
TMEM254-213ENST00000613758 BCL2L10Q9HD36 194 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms