RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 STX18Q9P2W9 335 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-211ENST00000595945 SAMD4AQ9UPU9 718 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-211ENST00000595945 PADI2Q9Y2J8 665 aa13.67□□□□□ -0.22
SHKBP1-211ENST00000595945 AP4S1Q9Y587 144 aa13.67□□□□□ -0.22
SHKBP1-211ENST00000595945 PCDHGB3Q9Y5G1 929 aa13.67□□□□□ -0.22
SHKBP1-211ENST00000595945 PCSK5Q92824 1860 aa13.67□□□□□ -0.22
SHKBP1-211ENST00000595945 CEP295Q9C0D2 2601 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 H0Y3Z8 333 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 STMND1H3BQB6 276 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 SOCS6O14544 535 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 MFN2O95140 757 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 H6PDO95479 791 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 ETS2P15036 469 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 ANPEPP15144 967 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 CD247P20963 164 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 MMP11P24347 488 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 PSMA4P25789 261 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 AQP1P29972 269 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 SLC26A5P58743 744 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 DCAF7P61962 342 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 AP2B1P63010 937 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 CHRNEQ04844 493 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 RTP5Q14D33 572 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 RCN1Q15293 331 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 ZNHIT3Q15649 155 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 GPAT3Q53EU6 434 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 DCST2Q5T1A1 773 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 TYW3Q6IPR3 259 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 C16orf62Q7Z3J2 963 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 PPP1R32Q7Z5V6 425 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 DTX1Q86Y01 620 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 AMER2Q8N7J2 671 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 PIK3R3Q92569 461 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 PYURFQ96I23 114 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 GPR87Q9BY21 358 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 ZNF350Q9GZX5 532 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 MAGIXQ9H6Y5 334 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 POLE3Q9NRF9 147 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 PCDHGA6Q9Y5G7 932 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 MED13Q9UHV7 2174 aa13.66□□□□□ -0.22
SHKBP1-211ENST00000595945 HEATR5AQ86XA9 2040 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 IGHV1-45A0A0A0MS14 117 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 LOC101059948A0A1B0GTJ6 334 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 TO15178 435 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 SEC24DO94855 1032 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 KCNK2O95069 426 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 IFNA14P01570 189 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 IGKV1D-16P01601 117 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 OPN1SWP03999 348 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 RAP2AP10114 183 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 COX6A1P12074 109 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 HOXB6P17509 224 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 DRD5P21918 477 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 F8A1P23610 371 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 RPS18P62269 152 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 RPS15P62841 145 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 CYP27C1Q4G0S4 372 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 KIRREL2Q6UWL6 708 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 C17orf47Q8NEP4 570 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 PMM1Q92871 262 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 NKD1Q969G9 470 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 SLC47A1Q96FL8 570 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 VMP1Q96GC9 406 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 HSH2DQ96JZ2 352 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 IMMP1LQ96LU5 166 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 ZNF607Q96SK3 696 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 UGT2B28Q9BY64 529 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 Q9N2J8 555 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 FBXO34Q9NWN3 711 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 ADPRHL2Q9NX46 363 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 COPS7AQ9UBW8 275 aa13.65□□□□□ -0.22
SHKBP1-211ENST00000595945 AKAP13Q12802 2813 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 C2orf92A0A1B0GVN3 265 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 DCDC2BA2VCK2 349 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 FRG2CA6NGY1 282 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 SUV39H1O43463 412 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 PRKNO60260 465 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 KIAA0513O60268 411 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 FCMRO60667 390 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 STX11O75558 287 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF682O95780 498 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 RPS4Y1P22090 263 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 DLSTP36957 453 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 PIGAP37287 484 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 MAGEA2P43356 314 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 SELENOWP63302 87 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 KCNJ10P78508 379 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 CHRNB3Q05901 458 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 SSPNQ14714 243 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 FAM98BQ52LJ0 330 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 TBCELQ5QJ74 424 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 CCNJQ5T5M9 372 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 KRT73Q86Y46 540 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 LILRA2Q8N149 483 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 GPR32P1Q8NGA4 272 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 OR11G2Q8NGC1 345 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 OR4N2Q8NGD1 307 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 OR8K3Q8NH51 312 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 APOBEC4Q8WW27 367 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms