RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PSMA3P25788 255 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 RUNX2Q13950 521 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 CCNIQ14094 377 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ELAVL1Q15717 326 aaKnown RBP9.46□□□□□ -0.89
SMG6-213ENST00000573166 FAM219BQ5XKK7 198 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 SLC30A6Q6NXT4 461 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ERMP1Q7Z2K6 904 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ZNF440Q8IYI8 595 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 NLGN4XQ8N0W4 816 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 SLC25A45Q8N413 288 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 LINC00471Q8N535 108 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 C8orf44Q96CB5 159 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ELP4Q96EB1 424 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 HHATLQ9HCP6 504 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 GALNT8Q9NY28 637 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 PCYT1BQ9Y5K3 369 aaPredicted RBP9.46□□□□□ -0.89
SMG6-213ENST00000573166 HOXB3P14651 431 aaPredicted RBP9.46□□□□□ -0.89
SMG6-213ENST00000573166 ITIH1P19827 911 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 IL12AP29459 219 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 GABREP78334 506 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 VEZF1Q14119 521 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 DSG2Q14126 1118 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 C16orf72Q14CZ0 275 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ZNF423Q2M1K9 1284 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 FOXB2Q5VYV0 432 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 SERPINA11Q86U17 422 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.46□□□□□ -0.89
SMG6-213ENST00000573166 HMGCLL1Q8TB92 370 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 OR2A5Q96R48 311 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 TAAR9Q96RI9 348 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 BTBD2Q9BX70 525 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ASPNQ9BXN1 380 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ATP13A2Q9NQ11 1180 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ASIC5Q9NY37 505 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 NOTCH4Q99466 2003 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 A0A087WXM4 84 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 A0A1W2PR77 199 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 OR2W5A6NFC9 320 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 D6RAR5 112 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 PROM1O43490 865 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 B4GAT1O43505 415 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 FRS3O43559 492 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 STK17BO94768 372 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 RCBTB2O95199 551 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 NUDT7P0C024 238 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 CDK4P11802 303 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 GSTM3P21266 225 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 ELOAQ14241 798 aaKnown RBP9.46□□□□□ -0.9
SMG6-213ENST00000573166 COLEC12Q5KU26 742 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 STPG1Q5TH74 334 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 LINC00696Q6ZRV3 163 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 CLVS1Q8IUQ0 354 aaPredicted RBP9.46□□□□□ -0.9
SMG6-213ENST00000573166 EGFL6Q8IUX8 553 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 ZNF619Q8N2I2 560 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 TMEM151AQ8N4L1 468 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 METTL25Q8N6Q8 603 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 OR1L3Q8NH93 324 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 TM9SF4Q92544 642 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 NR4A3Q92570 626 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 TSLPQ969D9 159 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 ZPBPQ9BS86 351 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 NRSN2Q9GZP1 204 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 ANKRA2Q9H9E1 313 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 TSC22D4Q9Y3Q8 395 aa9.46□□□□□ -0.9
SMG6-213ENST00000573166 ZFHX2Q9C0A1 2572 aaPredicted RBP9.46□□□□□ -0.9
SMG6-213ENST00000573166 ACOT7O00154 380 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 SNX4O95219 450 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 TSPAN19P0C672 248 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 GIMD1P0DJR0 217 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 CD1EP15812 388 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 PCGF2P35227 344 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 EFR3AQ14156 821 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 OR5M10Q6IEU7 315 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 CA13Q8N1Q1 262 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 DGCR6LQ9BY27 220 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 PALMDQ9NP74 551 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 PPT2Q9UMR5 302 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 FARSAQ9Y285 508 aaKnown RBP9.45□□□□□ -0.9
SMG6-213ENST00000573166 VSTM2BA6NLU5 285 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 M0R3H8 397 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 SEC14L5O43304 696 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 SOX14O95416 240 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 ZNF28P17035 718 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 MS4A2Q01362 244 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 CD47Q08722 323 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 IL11RAQ14626 422 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 NADK2Q4G0N4 442 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 TRMT12Q53H54 448 aaKnown RBP9.45□□□□□ -0.9
SMG6-213ENST00000573166 TMEM225Q6GV28 225 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 FAM220AQ7Z4H9 259 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 GPAT4Q86UL3 456 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 OR14L1PQ8NHC6 308 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 MYDGFQ969H8 173 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 SLC46A1Q96NT5 459 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 OR1F2PQ96R84 312 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 KLHL1Q9NR64 748 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 UBQLN4Q9NRR5 601 aa9.45□□□□□ -0.9
SMG6-213ENST00000573166 TMEM181Q9P2C4 612 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms