RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DLSTP36957 453 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 SELENOWP63302 87 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 DNASE1L3Q13609 305 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 GNA13Q14344 377 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 EBPQ15125 230 aaKnown RBP9.42□□□□□ -0.9
SMG1-208ENST00000563448 TBCELQ5QJ74 424 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 IRAK1BP1Q5VVH5 260 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 TYW3Q6IPR3 259 aaKnown RBP9.42□□□□□ -0.9
SMG1-208ENST00000563448 FIGNL1Q6PIW4 674 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 FRRS1Q6ZNA5 592 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 VTCN1Q7Z7D3 282 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 APCDD1LQ8NCL9 501 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 SLC47A1Q96FL8 570 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 HSH2DQ96JZ2 352 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 RNF145Q96MT1 663 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 BTBD9Q96Q07 612 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 LPAR4Q99677 370 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 UGT2B28Q9BY64 529 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 PCNX3Q9H6A9 2034 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 ASCL3Q9NQ33 180 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 CALML5Q9NZT1 146 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 COPS7AQ9UBW8 275 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 CFL2Q9Y281 166 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 PADI2Q9Y2J8 665 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 PCDHGB3Q9Y5G1 929 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 HS3ST3B1Q9Y662 390 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 HEATR5AQ86XA9 2040 aa9.42□□□□□ -0.9
SMG1-208ENST00000563448 IGHV1-45A0A0A0MS14 117 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 TTC36A6NLP5 189 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 OR6C76A6NM76 312 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 SOCS6O14544 535 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 SUV39H1O43463 412 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 TIPRLO75663 272 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 PDE9AO76083 593 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 SOX30O94993 753 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 KCNK2O95069 426 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 BAG2O95816 211 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 AK1P00568 194 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 IGKV1D-16P01601 117 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 IGHEP01854 428 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 CD247P20963 164 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 MMP11P24347 488 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 RBMS1P29558 406 aaKnown RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 TRHRP34981 398 aaPredicted RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 PPICP45877 212 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 SLC26A5P58743 744 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 RPS15P62841 145 aaKnown RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 CHRNB3Q05901 458 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 CAMK2BQ13554 666 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 NNATQ16517 81 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 DUSP7Q16829 419 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 HMGN2P46Q86SG4 172 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 LILRA2Q8N149 483 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 SMYD1Q8NB12 490 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 NKD1Q969G9 470 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ZG16BQ96DA0 208 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 RMND5BQ96G75 393 aaPredicted RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 TPD52L3Q96J77 140 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 COL21A1Q96P44 957 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ZNF607Q96SK3 696 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 PKP2Q99959 881 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 DOHHQ9BU89 302 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ZNF350Q9GZX5 532 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 SAP130Q9H0E3 1048 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ZNF700Q9H0M5 742 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 QRSL1Q9H0R6 528 aaKnown RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 NXF5Q9H1B4 397 aaKnown RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 MAGIXQ9H6Y5 334 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ADPRHL2Q9NX46 363 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 MKLN1Q9UL63 735 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 C2orf92A0A1B0GVN3 265 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 C21orf140B9A014 251 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 PCDH17O14917 1159 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 MT-ND1P03886 318 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 RAP2AP10114 183 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 COX6A1P12074 109 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ETS2P15036 469 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 DRD5P21918 477 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 CD82P27701 267 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 RNF4P78317 190 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 KCNJ10P78508 379 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 HPCAP84074 193 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 SLC34A1Q06495 639 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 SSPNQ14714 243 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 FAM98BQ52LJ0 330 aaKnown RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 HMBOX1Q6NT76 420 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 KIRREL2Q6UWL6 708 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 PPP1R32Q7Z5V6 425 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ZAR1Q86SH2 424 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 ZNF441Q8N8Z8 693 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 LRTOMTQ8WZ04 291 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 POP5Q969H6 163 aaKnown RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 VMP1Q96GC9 406 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 LCORQ96JN0 433 aaPredicted RBP9.41□□□□□ -0.9
SMG1-208ENST00000563448 GAL3ST4Q96RP7 486 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 LMF1Q96S06 567 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms