RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CELA3AP09093 270 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 RFPL3SP0C7P2 107 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 ESRRAP11474 423 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 ELAVL4P26378 380 aaKnown RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 IL12BP29460 328 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 GPC1P35052 558 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 KRT20P35900 424 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 MASP1P48740 699 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 PSG6Q00889 435 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 EMX2Q04743 252 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 SNTA1Q13424 505 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 EFR3AQ14156 821 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 SLC10A1Q14973 349 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 ZNHIT3Q15649 155 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 AGBL2Q5U5Z8 902 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 IL23RQ5VWK5 629 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 DOLPP1Q86YN1 238 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 SLC44A2Q8IWA5 706 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 LRRC34Q8IZ02 419 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 RAB3IL1Q8TBN0 382 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 MGARPQ8TDB4 240 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 PHF10Q8WUB8 498 aaKnown RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 ITLN2Q8WWU7 325 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 HPS1Q92902 700 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 JSRP1Q96MG2 331 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 NODALQ96S42 347 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 VKORC1Q9BQB6 163 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 OSBPL11Q9BXB4 747 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 NOP53Q9NZM5 478 aaKnown RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 KLRF1Q9NZS2 232 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 MEMO1Q9Y316 297 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 OR10H1Q9Y4A9 318 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 TRGV5A0A0B4J1U4 118 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 BCKDKO14874 412 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 REM1O75628 298 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 PRPS1L1P21108 318 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 GDF1P27539 372 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 MAN2A2P49641 1150 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 CDK9P50750 372 aaKnown RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 PNLIPRP2P54317 469 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 MANFP55145 182 aaKnown RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 C21orf58P58505 322 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 MRPS22P82650 360 aaKnown RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 ADORA2A-AS1P86434 159 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 MLC1Q15049 377 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 CYP27C1Q4G0S4 372 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 FNDC7Q5VTL7 733 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 TIGD3Q6B0B8 471 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 SLC30A6Q6NXT4 461 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 LARP4Q71RC2 724 aaKnown RBP eCLIP10.55□□□□□ -0.722e-8■■□□□ 12.5
SLIRP-205ENST00000556310 TRIM42Q8IWZ5 723 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 RIMKLAQ8IXN7 391 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 ZNF808Q8N4W9 903 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 NATD1Q8N6N6 113 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 OR7A2PQ8NGA2 310 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 RNF138Q8WVD3 245 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 HOXB13Q92826 284 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 TMCO6Q96DC7 493 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 ITPKCQ96DU7 683 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 PPP1R36Q96LQ0 422 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 MS4A4EQ96PG1 132 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 DMRTA2Q96SC8 542 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 ADOQ96SZ5 270 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 LMF2Q9BU23 707 aaKnown RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 UBQLN3Q9H347 655 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 TP63Q9H3D4 680 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 LDAHQ9H6V9 325 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 AKTIPQ9H8T0 292 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 Q9N2J8 555 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 ACKR4Q9NPB9 350 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 ATAD3AQ9NVI7 634 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 ARGLU1Q9NWB6 273 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-205ENST00000556310 NTMQ9P121 344 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 MAPRE3Q9UPY8 281 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
SLIRP-205ENST00000556310 CRYBG3Q68DQ2 2970 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 FIGNL2A6NMB9 653 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 NPIPA2E9PIF3 369 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 NPIPA3F8WFD2 350 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ADAM10O14672 748 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ICOSLGO75144 302 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 SNNO75324 88 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-205ENST00000556310 LAMP1P11279 417 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 G6PDP11413 515 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 AGAP20933 346 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ENDOUP21128 410 aaKnown RBP10.54□□□□□ -0.72
SLIRP-205ENST00000556310 PTGDSP41222 190 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 SMSP52788 366 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 VPS26BQ4G0F5 336 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 CPTPQ5TA50 214 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ATG16L1Q676U5 607 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ANGPTL8Q6UXH0 198 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 C3P1Q6ZMU1 363 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 SZRD1Q7Z422 152 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 CAMKMTQ7Z624 323 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 MRGPRGQ86SM5 289 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 NAV2Q8IVL1 2488 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 KRTCAP2Q8N6L1 136 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 CDRT4Q8N9R6 151 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms