RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LGI1O95970 557 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 IGKV3-11P04433 115 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 DBIP07108 87 aaKnown RBP8.72□□□□□ -1.01
VPS52-216ENST00000471309 CYC1P08574 325 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 TNNI3P19429 210 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 GABRA3P34903 492 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 TRHRP34981 398 aaPredicted RBP8.72□□□□□ -1.01
VPS52-216ENST00000471309 CAPGP40121 348 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 TSPAN7P41732 249 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 LIMS1P48059 325 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 PGDP52209 483 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 EFNA3P52797 238 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 RAD23AP54725 363 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 CDH12P55289 794 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 POU6F2P78424 691 aaPredicted RBP8.72□□□□□ -1.01
VPS52-216ENST00000471309 DCDP81605 110 aaKnown RBP8.72□□□□□ -1.01
VPS52-216ENST00000471309 MC2RQ01718 297 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 SPIBQ01892 262 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 OCA2Q04671 838 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 PDK3Q15120 406 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 RFX4Q33E94 735 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 SLC36A3Q495N2 470 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 CYP27C1Q4G0S4 372 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 EIPR1Q53HC9 387 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 VWA2Q5GFL6 755 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 RNF220Q5VTB9 566 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 FAHD1Q6P587 224 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 CYP4Z1Q86W10 505 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 PEX5LQ8IYB4 626 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 HS3ST5Q8IZT8 346 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 SLC38A9Q8NBW4 561 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 PLPP5Q8NEB5 264 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 OR14A16Q8NHC5 309 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 C16orf52Q8NHV5 167 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 PIK3R3Q92569 461 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 NR4A3Q92570 626 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 ART5Q96L15 291 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 DHRS1Q96LJ7 313 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 LRFN5Q96NI6 719 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 ARHGDIGQ99819 225 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 VN1R1Q9GZP7 353 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 QRSL1Q9H0R6 528 aaKnown RBP8.72□□□□□ -1.01
VPS52-216ENST00000471309 OR10A5Q9H207 317 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 SLC26A1Q9H2B4 701 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 APMAPQ9HDC9 416 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 FBXO8Q9NRD0 319 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 RXFP3Q9NSD7 469 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 KLHL28Q9NXS3 571 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 C3orf18Q9UK00 162 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 ACAD8Q9UKU7 415 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 CFL2Q9Y281 166 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 ZNF443Q9Y2A4 671 aaPredicted RBP8.72□□□□□ -1.01
VPS52-216ENST00000471309 FAM32AQ9Y421 112 aaKnown RBP8.72□□□□□ -1.01
VPS52-216ENST00000471309 TESMINQ9Y4I5 508 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 ASXL3Q9C0F0 2248 aa8.72□□□□□ -1.01
VPS52-216ENST00000471309 FER1L5A0AVI2 2057 aa8.71□□□□□ -1.01
VPS52-216ENST00000471309 SDK1Q7Z5N4 2213 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 CABIN1Q9Y6J0 2220 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 RFPL3O75679 317 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 KCNK2O95069 426 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 SNAP29O95721 258 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 DDAH2O95865 285 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 ALBP02768 609 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 IGFBP5P24593 272 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 HMGA2P52926 109 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 ADARB1P78563 741 aaKnown RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 E2F1Q01094 437 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 PPP1R8Q12972 351 aaKnown RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 LARS2Q15031 903 aaKnown RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 NSDHLQ15738 373 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 CSRP2Q16527 193 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 LIN52Q52LA3 116 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 COLEC12Q5KU26 742 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 CCNJQ5T5M9 372 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 KDM4DQ6B0I6 523 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 TCTN3Q6NUS6 607 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 UGT2A3Q6UWM9 527 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 NPSR1Q6W5P4 371 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 DEF8Q6ZN54 512 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 ZNF836Q6ZNA1 936 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 OVCH1Q7RTY7 1134 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 COMTD1Q86VU5 262 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 VRK2Q86Y07 508 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 TMEM151BQ8IW70 566 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 DHRSXQ8N5I4 330 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 OR4D11Q8NGI4 311 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 OR52P1PQ8NH57 321 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 VANGL1Q8TAA9 524 aaPredicted RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 STT3BQ8TCJ2 826 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 SLC2A12Q8TD20 617 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 ATOH1Q92858 354 aaPredicted RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 DAZLQ92904 295 aaKnown RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 GATA6Q92908 595 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 RMND5BQ96G75 393 aaPredicted RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 CNBD2Q96M20 576 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 PRRC1Q96M27 445 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 SLC46A1Q96NT5 459 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 MBOAT4Q96T53 435 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 BARD1Q99728 777 aaKnown RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 CDC6Q99741 560 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms