RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 STON2Q8WXE9 905 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 EFHD2Q96C19 240 aaPredicted RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 GIMAP5Q96F15 307 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 SLC35A4Q96G79 324 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 JSRP1Q96MG2 331 aaPredicted RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 YIPF4Q9BSR8 244 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 TSPAN10Q9H1Z9 355 aaPredicted RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 RMND5AQ9H871 391 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 IL1RL2Q9HB29 575 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 FGFR1OP2Q9NVK5 253 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 KLRF1Q9NZS2 232 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 SEC14L3Q9UDX4 400 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 BTNL2Q9UIR0 455 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 RELNP78509 3460 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 COL12A1Q99715 3063 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 A0A0G2JMM0 328 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 RNF103-CHMP3A0A140T963 221 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 A0A1W2PPB8 328 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 A0A1W2PRS3 328 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 FAM234BA2RU67 622 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 ANKRD33BA6NCL7 494 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 FAM166BA8MTA8 275 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 KIR3DP1A8MWS1 328 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 TSPAN2O60636 221 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 SCN2BO60939 215 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 UGT2B11O75310 529 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 SOX30O94993 753 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 NKX2-2O95096 273 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 HMGN2P05204 90 aaKnown RBP12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 NCF2P19878 526 aaPredicted RBP12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 MST1P26927 711 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 CHI3L1P36222 383 aaPredicted RBP12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 CASP3P42574 277 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 MASP1P48740 699 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 PNLIPRP2P54317 469 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 PHC1P78364 1004 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 IRX1P78414 480 aaPredicted RBP12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 RBPJQ06330 500 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 KRTCAP3Q53RY4 240 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 TRIML2Q8N7C3 387 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 COX18Q8N8Q8 333 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 ADAMTS15Q8TE58 950 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 HGDQ93099 445 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 RMND5BQ96G75 393 aaPredicted RBP12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 ZNF597Q96LX8 424 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 CCDC115Q96NT0 180 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 PANX1Q96RD7 426 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 SLX1AQ9BQ83 275 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 ACTRT3Q9BYD9 372 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 TTTY12Q9BZ98 90 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 RABEP2Q9H5N1 569 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 CCDC134Q9H6E4 229 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 TUBA8Q9NY65 449 aaPredicted RBP12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 B4GALT7Q9UBV7 327 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
GTF3C3-206ENST00000448539 PINLYPA6NC86 204 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 PRAMEF25A6NGN4 478 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 RFXANKO14593 260 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 UNC5CO95185 931 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 CBX6O95503 412 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 IL33O95760 270 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 ACP2P11117 423 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 UQCRC2P22695 453 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 CLK3P49761 638 aaKnown RBP12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 ATP4BP51164 291 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 TDGF1P3P51864 188 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 ARFIP2P53365 341 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 KCNK10P57789 538 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 MRPL49Q13405 166 aaKnown RBP12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 SNTA1Q13424 505 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 SQLEQ14534 574 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 BICRALQ6AI39 1079 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 SLC30A6Q6NXT4 461 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 CDC73Q6P1J9 531 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 BNC2Q6ZN30 1099 aaPredicted RBP12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 C6orf120Q7Z4R8 191 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 SLC16A11Q8NCK7 471 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 PIK3R3Q92569 461 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 C16orf58Q96GQ5 468 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 ITCHQ96J02 903 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 SLC35G5Q96KT7 338 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 GPR137Q96N19 417 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 NODALQ96S42 347 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 STACQ99469 402 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 OSBPL11Q9BXB4 747 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 ZFP64Q9NPA5 681 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 GIN1Q9NXP7 522 aa12.86□□□□□ -0.35
GTF3C3-206ENST00000448539 GXYLT2A0PJZ3 443 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 DUXAA6NLW8 204 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 CYSRT1A8MQ03 144 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 ASNA1O43681 348 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 CDC40O60508 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 ANP32DO95626 131 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 CYP4B1P13584 511 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 MATN1P21941 496 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 MAP3K8P41279 467 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 UQCRFS1P47985 274 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms