RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 BRINP2Q9C0B6 783 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 OR2B2Q9GZK3 357 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 SSU72Q9NP77 194 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 SERHLQ9NQF3 203 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 NMRK1Q9NWW6 199 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 CAMK2AQ9UQM7 478 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ACTL7BQ9Y614 415 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 DNHD1Q96M86 4753 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 FLNAP21333 2647 aaKnown RBP11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 CAPN14A8MX76 684 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 TM9SF1O15321 606 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZIC3O60481 467 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 CHRNGP07510 517 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 NEFHP12036 1026 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 SERPINB4P48594 390 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 CORO7P57737 925 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 B3GALT5-AS1P59052 145 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 HMGCS1Q01581 520 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 ARL13AQ5H913 290 aaPredicted RBP11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 SPDYAQ5MJ70 313 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 HLA-DQA1Q5Y7H0 255 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 SLC30A6Q6NXT4 461 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 PAGE2Q7Z2X7 111 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 HDXQ7Z353 690 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 TGIF2LYQ8IUE0 185 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 OR4N2Q8NGD1 307 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 OR1J4Q8NGS1 313 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 AGR3Q8TD06 166 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 MGARPQ8TDB4 240 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 NINJ1Q92982 152 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 ARL8AQ96BM9 186 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 VSTM2LQ96N03 204 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 UCN2Q96RP3 112 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 ACPTQ9BZG2 426 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 CLEC4MQ9H2X3 399 aaPredicted RBP11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 PLEKHF2Q9H8W4 249 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 CALHM2Q9HA72 323 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 BCAP29Q9UHQ4 241 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 FBXL2Q9UKC9 423 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 ABCA4P78363 2273 aa11.29□□□□□ -0.6
NCKIPSD-203ENST00000415281 TMEM120BA0PK00 339 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 H3BQF6 201 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 DVL2O14641 736 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 NPHS1O60500 1241 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 DIAPH2O60879 1101 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 ACTL6AO96019 429 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 IL3P08700 152 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 UROSP10746 265 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 HSD3B1P14060 373 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 TACR1P25103 407 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 CTSSP25774 331 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 HSD3B2P26439 372 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 LHX2P50458 406 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 NRG3P56975 720 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRA2BP62995 288 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 CSTF3Q12996 717 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 SNTA1Q13424 505 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 CHI3L2Q15782 390 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 HHATQ5VTY9 493 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRIM42Q8IWZ5 723 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 PM20D2Q8IYS1 436 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 GBP7Q8N8V2 638 aaPredicted RBP11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 OR7G2Q8NG99 324 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 C16orf78Q8WTQ4 265 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 FAM222BQ8WU58 562 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 KAT2AQ92830 837 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 TMBIM1Q969X1 311 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 TLCD1Q96CP7 247 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 SLC35A4Q96G79 324 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRMOQ9BU70 441 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 OSBPL11Q9BXB4 747 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 EML4Q9HC35 981 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 MAPRE3Q9UPY8 281 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 DLGAP4Q9Y2H0 992 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 RPH3AQ9Y2J0 694 aaPredicted RBP11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRAF6Q9Y4K3 522 aa11.28□□□□□ -0.6
NCKIPSD-203ENST00000415281 SERTM1A2A2V5 107 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 FRG2CA6NGY1 282 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 OR6C70A6NIJ9 312 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 TMEM233B4DJY2 109 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 AZIN1O14977 448 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 ACOX3O15254 700 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 BIRC5O15392 142 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 ITM2AO43736 263 aa11.27□□□□□ -0.61
NCKIPSD-203ENST00000415281 CBR3O75828 277 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms