RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ENDOUP21128 410 aaKnown RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 ELAVL4P26378 380 aaKnown RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 CDK9P50750 372 aaKnown RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 ZNF155Q12901 538 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 EFR3AQ14156 821 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 C3P1Q6ZMU1 363 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 WDR53Q7Z5U6 358 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 MRGPRGQ86SM5 289 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 ZNF808Q8N4W9 903 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 NEIL3Q8TAT5 605 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 GIMAP5Q96F15 307 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 PPP1R36Q96LQ0 422 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 PRPF18Q99633 342 aaKnown RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 NUF2Q9BZD4 464 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 MANSC1Q9H8J5 431 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 GALNT9Q9HCQ5 603 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 SIRT3Q9NTG7 399 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-205ENST00000372244 CBLCQ9ULV8 474 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 C15orf41Q9Y2V0 281 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 OR10H1Q9Y4A9 318 aa18.3■□□□□ 0.52
TMEM53-205ENST00000372244 A0A1W2PRB8 838 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 PRAMEF25A6NGN4 478 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 BCKDKO14874 412 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 HPNP05981 417 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 H2AFXP16104 143 aaPredicted RBP18.29■□□□□ 0.52
TMEM53-205ENST00000372244 PTPN6P29350 595 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 GPC1P35052 558 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 MAN2A2P49641 1150 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 DIO3P55073 304 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 ZNHIT3Q15649 155 aaPredicted RBP18.29■□□□□ 0.52
TMEM53-205ENST00000372244 ATG16L1Q676U5 607 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 XKRXQ6PP77 449 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 CAMKMTQ7Z624 323 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 EID3Q8N140 333 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 WDSUB1Q8N9V3 476 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 NUP43Q8NFH3 380 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 OR1J4Q8NGS1 313 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 OSBPL11Q9BXB4 747 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 TP63Q9H3D4 680 aaPredicted RBP18.29■□□□□ 0.52
TMEM53-205ENST00000372244 LDAHQ9H6V9 325 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 C3orf14Q9HBI5 128 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 ATAD3AQ9NVI7 634 aa18.29■□□□□ 0.52
TMEM53-205ENST00000372244 KLF11O14901 512 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 SNPHO15079 494 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 EMC8O43402 210 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 EFNA1P20827 205 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-205ENST00000372244 GDF1P27539 372 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 KRT20P35900 424 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 MASP1P48740 699 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 GAS1P54826 345 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 MRPS22P82650 360 aaKnown RBP18.28■□□□□ 0.52
TMEM53-205ENST00000372244 OCRLQ01968 901 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 ART3Q13508 389 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 EXOSC6Q5RKV6 272 aaKnown RBP18.28■□□□□ 0.52
TMEM53-205ENST00000372244 TRIM42Q8IWZ5 723 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 OR5P2Q8WZ92 322 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 SARAFQ96BY9 339 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 EFHD2Q96C19 240 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-205ENST00000372244 BHLHE41Q9C0J9 482 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-205ENST00000372244 Q9N2J8 555 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 PNPLA3Q9NST1 481 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 KLRF1Q9NZS2 232 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 SPRR3Q9UBC9 169 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 MAPRE3Q9UPY8 281 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 NUP214P35658 2090 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-205ENST00000372244 NAV2Q8IVL1 2488 aa18.28■□□□□ 0.52
TMEM53-205ENST00000372244 NCOA6Q14686 2063 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-205ENST00000372244 C2orf72A6NCS6 295 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 CYSRT1A8MQ03 144 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 ANKRD28O15084 1053 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 NKX2-2O95096 273 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 IL33O95760 270 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 LBPP18428 481 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 IL12BP29460 328 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 GABRA3P34903 492 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 SMSP52788 366 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 DECR1Q16698 335 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 HIST2H2BCQ6DN03 193 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 OGFOD2Q6N063 350 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 ZCCHC12Q6PEW1 402 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 ANGPTL8Q6UXH0 198 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 HDXQ7Z353 690 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 MARVELD2Q8N4S9 558 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 CDRT4Q8N9R6 151 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 FAM120BQ96EK7 910 aaKnown RBP18.27■□□□□ 0.52
TMEM53-205ENST00000372244 ATP6V1G3Q96LB4 118 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 SH3GL2Q99962 352 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 TNFRSF10DQ9UBN6 386 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 ACAD8Q9UKU7 415 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 PCDHGB3Q9Y5G1 929 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 FREM3P0C091 2139 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 NOTCH2Q04721 2471 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 NCKAP5O14513 1909 aa18.27■□□□□ 0.52
TMEM53-205ENST00000372244 GNB5O14775 395 aa18.26■□□□□ 0.51
TMEM53-205ENST00000372244 HDAC3O15379 428 aa18.26■□□□□ 0.51
TMEM53-205ENST00000372244 FADS1O60427 444 aa18.26■□□□□ 0.51
TMEM53-205ENST00000372244 CBR3O75828 277 aa18.26■□□□□ 0.51
TMEM53-205ENST00000372244 CYP4B1P13584 511 aa18.26■□□□□ 0.51
TMEM53-205ENST00000372244 PRKAG1P54619 331 aa18.26■□□□□ 0.51
TMEM53-205ENST00000372244 LSM12Q3MHD2 195 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms