RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 REV1Q9UBZ9 1251 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 TRBV4-1A0A0J9YWV2 114 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 C5orf58C9J3I9 102 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 KIAA0513O60268 411 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 FCMRO60667 390 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 CTNSO60931 367 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 UGT2B11O75310 529 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 NKX2-2O95096 273 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 CPNE6O95741 557 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 THY1P04216 161 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 IFNW1P05000 195 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 RPL5P46777 297 aaKnown RBP8.3□□□□□ -1.08
TDP1-210ENST00000554976 YAP1P46937 504 aaKnown RBP8.3□□□□□ -1.08
TDP1-210ENST00000554976 HLCSP50747 726 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 ANXA11P50995 505 aaKnown RBP8.3□□□□□ -1.08
TDP1-210ENST00000554976 PRKAG1P54619 331 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 GABARAPL2P60520 117 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 HSD11B2P80365 405 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 MAT1AQ00266 395 aaKnown RBP8.3□□□□□ -1.08
TDP1-210ENST00000554976 SPIBQ01892 262 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 NADK2Q4G0N4 442 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 PERM1Q5SV97 790 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 THAP5Q7Z6K1 395 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 PARP8Q8N3A8 854 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 GIPC3Q8TF64 312 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 CCDC74AQ96AQ1 378 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 ZNF501Q96CX3 271 aaPredicted RBP8.3□□□□□ -1.08
TDP1-210ENST00000554976 CXorf21Q9HAI6 301 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 DUSP22Q9NRW4 184 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 HCN3Q9P1Z3 774 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 FTSJ1Q9UET6 329 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 NDOR1Q9UHB4 597 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 PCDHGA6Q9Y5G7 932 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 VCANP13611 3396 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 TOX3O15405 576 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 LYPD3O95274 346 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 AGR2O95994 175 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 NR2F1P10589 423 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 STT3AP46977 705 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 EMDP50402 254 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 CDH12P55289 794 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 CDH15P55291 814 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 GNA13Q14344 377 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 FAM214AQ32MH5 1076 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 RBM48Q5RL73 367 aaKnown RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 GALNT5Q7Z7M9 940 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 VRK2Q86Y07 508 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 OR10G2Q8NGC3 310 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 OR9Q2Q8NGE9 314 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 OR6T1Q8NGN1 323 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 NECAB3Q96P71 396 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 SDF2Q99470 211 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 FEVQ99581 238 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 TRPC4Q9UBN4 977 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 FBXO4Q9UKT5 387 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 M0R3H8 397 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 HRKO00198 91 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 BCKDKO14874 412 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 ZNF749O43361 778 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 DUX1O43812 170 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 WBP4O75554 376 aaKnown RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 SERPINB7O75635 380 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 RNH1P13489 461 aaKnown RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 FOLR1P15328 257 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 MAPK10P53779 464 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 BTG2P78543 158 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 PSG6Q00889 435 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 FUT7Q11130 342 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 NPRL3Q12980 569 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 GANABQ14697 944 aaKnown RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 NDUFA9Q16795 377 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 HLA-BQ31612 363 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 COLEC12Q5KU26 742 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 XAF1Q6GPH4 301 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 KRT80Q6KB66 452 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 TTC33Q6PID6 262 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 KLHL17Q6TDP4 642 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 ZNF836Q6ZNA1 936 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 C8orf59Q8N0T1 100 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 TTC29Q8NA56 475 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 VSTM2LQ96N03 204 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 NMNAT1Q9HAN9 279 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 EQTNQ9NQ60 294 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 DDX18Q9NVP1 670 aaKnown RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 SEC14L3Q9UDX4 400 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 SPACA6W5XKT8 324 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 A0A1W2PQM1 296 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 A0A1W2PRQ8 180 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 DUXAA6NLW8 204 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 OR6B1O95007 311 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 GADD45GO95257 159 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 CLPTM1O96005 669 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 GASTP01350 101 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 THBS1P07996 1170 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 IL7RP16871 459 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 AGXTP21549 392 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 PPP2R1BP30154 601 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 DHPSP49366 369 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 ZNF136P52737 540 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 RAD23AP54725 363 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms