RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 A0A1B0GVC2 190 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 LRRC3CA6NJW4 275 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 NPIPA2E9PIF3 369 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 NPIPA3F8WFD2 350 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 BCKDKO14874 412 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 SCAMP2O15127 329 aaKnown RBP14.41□□□□□ -0.1
CCDC78-216ENST00000544996 HCN1O60741 890 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 UGT2B11O75310 529 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 CLDN1O95832 211 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 CELA3AP09093 270 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 RFPL3SP0C7P2 107 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 PRPS1L1P21108 318 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 ELAVL4P26378 380 aaKnown RBP14.41□□□□□ -0.1
CCDC78-216ENST00000544996 GDF1P27539 372 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 SNTA1Q13424 505 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 EFR3AQ14156 821 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 PDCD2Q16342 344 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-216ENST00000544996 SMU1Q2TAY7 513 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 CYP27C1Q4G0S4 372 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 TMEM81Q6P7N7 255 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 XKRXQ6PP77 449 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 NPSR1Q6W5P4 371 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 MRGPRGQ86SM5 289 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF808Q8N4W9 903 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-216ENST00000544996 MGARPQ8TDB4 240 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 HGDQ93099 445 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 SARAFQ96BY9 339 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 TMEM41AQ96HV5 264 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 PHF12Q96QT6 1004 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 ADOQ96SZ5 270 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 TP63Q9H3D4 680 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-216ENST00000544996 ACKR4Q9NPB9 350 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 ATAD3AQ9NVI7 634 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 ATP6V1HQ9UI12 483 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 MRTO4Q9UKD2 239 aaKnown RBP14.41□□□□□ -0.1
CCDC78-216ENST00000544996 ZGRF1Q86YA3 2104 aa14.41□□□□□ -0.1
CCDC78-216ENST00000544996 TTC36A6NLP5 189 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 AQP7O14520 342 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 TRAPPC6AO75865 159 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 FRKP42685 505 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-216ENST00000544996 PNLIPRP2P54317 469 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 PSG6Q00889 435 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 EMX2Q04743 252 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 BST1Q10588 318 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 PTGR1Q14914 329 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 GXYLT1Q4G148 440 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF385BQ569K4 471 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 CPTPQ5TA50 214 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 C3P1Q6ZMU1 363 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 LARP4Q71RC2 724 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC78-216ENST00000544996 TRIM42Q8IWZ5 723 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 NATD1Q8N6N6 113 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 OR1J4Q8NGS1 313 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 CEP70Q8NHQ1 597 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 PHF10Q8WUB8 498 aaKnown RBP14.4□□□□□ -0.1
CCDC78-216ENST00000544996 ITLN2Q8WWU7 325 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-216ENST00000544996 TLCD1Q96CP7 247 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 SLC35A4Q96G79 324 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 PPP1R36Q96LQ0 422 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 GNRHR2Q96P88 292 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 NODALQ96S42 347 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 SORT1Q99523 831 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 OSBPL11Q9BXB4 747 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 C20orf27Q9GZN8 174 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 C3orf14Q9HBI5 128 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 Q9N2J8 555 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 NOP53Q9NZM5 478 aaKnown RBP14.4□□□□□ -0.1
CCDC78-216ENST00000544996 ACAD8Q9UKU7 415 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 MAPRE3Q9UPY8 281 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 LIPGQ9Y5X9 500 aa14.4□□□□□ -0.1
CCDC78-216ENST00000544996 PRAMEF25A6NGN4 478 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 FIGNL2A6NMB9 653 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 ICOSLGO75144 302 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 PSMG1O95456 288 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 AGAP20933 346 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 WDR4P57081 412 aaKnown RBP14.39□□□□□ -0.11
CCDC78-216ENST00000544996 MLC1Q15049 377 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 TOMM20Q15388 145 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 DECR1Q16698 335 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 VPS26BQ4G0F5 336 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 WLSQ5T9L3 541 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 ATG16L1Q676U5 607 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 TIGD3Q6B0B8 471 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 DESI1Q6ICB0 168 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 TMEM211Q6ICI0 200 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 ANGPTL8Q6UXH0 198 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 SZRD1Q7Z422 152 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 OR7A2PQ8NGA2 310 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 AKTIPQ9H8T0 292 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 THAP1Q9NVV9 213 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 ARGLU1Q9NWB6 273 aaPredicted RBP14.39□□□□□ -0.11
CCDC78-216ENST00000544996 HAO1Q9UJM8 370 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 C15orf41Q9Y2V0 281 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 USP9YO00507 2555 aaPredicted RBP14.39□□□□□ -0.11
CCDC78-216ENST00000544996 PTPN13Q12923 2485 aa14.39□□□□□ -0.11
CCDC78-216ENST00000544996 SETXQ7Z333 2677 aaKnown RBP14.38□□□□□ -0.11
CCDC78-216ENST00000544996 GNB5O14775 395 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 TSPAN2O60636 221 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 LAMP1P11279 417 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 G6PDP11413 515 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms