RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 OR1F2PQ96R84 312 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 DPYSL5Q9BPU6 564 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 NECTIN3Q9NQS3 549 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 ACAD8Q9UKU7 415 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 SATB2Q9UPW6 733 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 SEC16AO15027 2179 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 IGHV5-10-1A0A0J9YXX1 117 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 H3BNH8 94 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 SYT5O00445 386 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 SLC16A6O15403 523 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 SMNDC1O75940 238 aaKnown RBP eCLIP18.48■□□□□ 0.55
COPS7A-218ENST00000543939 GADD45GO95257 159 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 BIKQ13323 160 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 DSG2Q14126 1118 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 SERTAD2Q14140 314 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 GANABQ14697 944 aaKnown RBP18.48■□□□□ 0.55
COPS7A-218ENST00000543939 MICAQ29983 383 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 ZNF311Q5JNZ3 666 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 TYW3Q6IPR3 259 aaKnown RBP18.48■□□□□ 0.55
COPS7A-218ENST00000543939 BMP8AQ7Z5Y6 402 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 GALNT5Q7Z7M9 940 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 ATG16L2Q8NAA4 619 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 IFI44Q8TCB0 444 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 DHRS1Q96LJ7 313 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 GTPBP2Q9BX10 602 aaKnown RBP18.48■□□□□ 0.55
COPS7A-218ENST00000543939 ZNF350Q9GZX5 532 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 MTHFD2LQ9H903 347 aaPredicted RBP18.48■□□□□ 0.55
COPS7A-218ENST00000543939 KIF17Q9P2E2 1029 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 SLC9A8Q9Y2E8 581 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 MMACHCQ9Y4U1 282 aa18.48■□□□□ 0.55
COPS7A-218ENST00000543939 DPPA5A6NC42 116 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 M0R3H8 397 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 NKX2-2O95096 273 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 GALNSP34059 522 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 POLR2IP36954 125 aaKnown RBP18.47■□□□□ 0.55
COPS7A-218ENST00000543939 DHRS4L2Q6PKH6 230 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 DEF8Q6ZN54 512 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 VRK2Q86Y07 508 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 OR10G2Q8NGC3 310 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 RMND5BQ96G75 393 aaPredicted RBP18.47■□□□□ 0.55
COPS7A-218ENST00000543939 PSD2Q9BQI7 771 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 PELOQ9BRX2 385 aaKnown RBP18.47■□□□□ 0.55
COPS7A-218ENST00000543939 LMF2Q9BU23 707 aaKnown RBP18.47■□□□□ 0.55
COPS7A-218ENST00000543939 ZNF304Q9HCX3 659 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 RHCGQ9UBD6 479 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 MKLN1Q9UL63 735 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 MYRFQ9Y2G1 1151 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 WDR45Q9Y484 360 aa18.47■□□□□ 0.55
COPS7A-218ENST00000543939 LOC100130705A0A1B0GUX0 176 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 A0A1B0GX78 115 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 HRKO00198 91 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 PCDH17O14917 1159 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 AK1P00568 194 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 PRKAR1BP31321 381 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 EMDP50402 254 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 DAB2P98082 770 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 ACY1Q03154 408 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 ZNF155Q12901 538 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 COLEC12Q5KU26 742 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 DCST2Q5T1A1 773 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 TTC33Q6PID6 262 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 SLC5A8Q8N695 610 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 COX18Q8N8Q8 333 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 OR52P1PQ8NH57 321 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 GPR151Q8TDV0 419 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 PIK3R3Q92569 461 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 ZNF578Q96N58 590 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 FEVQ99581 238 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 ARHGDIGQ99819 225 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 YIPF2Q9BWQ6 316 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 SAP130Q9H0E3 1048 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 SMOC1Q9H4F8 434 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 NMNAT1Q9HAN9 279 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 KRT84Q9NSB2 600 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 CHST2Q9Y4C5 530 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 MUC3AQ02505 3323 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 SOX30O94993 753 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 ANXA8P13928 327 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 CDH2P19022 906 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 FBLP22087 321 aaKnown RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 SSTR4P31391 388 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 GABRA3P34903 492 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 MPLP40238 635 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 FUT7Q11130 342 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 CCNJQ5T5M9 372 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 RCBTB1Q8NDN9 531 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 OR6T1Q8NGN1 323 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 PHF10Q8WUB8 498 aaKnown RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 CCDC74BQ96LY2 380 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 GRIP2Q9C0E4 1043 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 TRIM45Q9H8W5 580 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 FOLH1BQ9HBA9 442 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 A4GNTQ9UNA3 340 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 IFT52Q9Y366 437 aa18.46■□□□□ 0.55
COPS7A-218ENST00000543939 HEMK1Q9Y5R4 338 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-218ENST00000543939 STX11O75558 287 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 SEC24DO94855 1032 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-218ENST00000543939 DUSP3P51452 185 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-218ENST00000543939 POU6F2P78424 691 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-218ENST00000543939 APOFQ13790 326 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms