RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MAZP56270 477 aaKnown RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CDC42P60953 191 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 RAP1AP62834 184 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SIM1P81133 766 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CSTF1Q05048 431 aaKnown RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SF3A3Q12874 501 aaKnown RBP eCLIP7.11□□□□□ -1.272e-6■■■■□ 20.9
HDAC3-216ENST00000523088 SNTB2Q13425 540 aaKnown RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ARHGEF7Q14155 803 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 MPPED2Q15777 294 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SOWAHAQ2M3V2 549 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 GCNT6Q5T4J0 391 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 KHDRBS2Q5VWX1 349 aaKnown RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 LPCAT3Q6P1A2 487 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ULK3Q6PHR2 472 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SHISA2Q6UWI4 295 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ASB18Q6ZVZ8 466 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 FGD2Q7Z6J4 655 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CARM1Q86X55 608 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 RAB43Q86YS6 212 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 IRF2BP1Q8IU81 584 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CBWD2Q8IUF1 395 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SKA3Q8IX90 412 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ZZZ3Q8IYH5 903 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF687Q8N1G0 1237 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 TTC9BQ8N6N2 239 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 GDPD1Q8N9F7 314 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 FAM181AQ8N9Y4 354 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 BHLHE22Q8NFJ8 381 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 OR4M2Q8NGB6 313 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 OR1N1Q8NGS0 311 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 OR2W6PQ8NHA6 318 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CKAP2Q8WWK9 683 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 OVCA2Q8WZ82 227 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SMPDL3AQ92484 453 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 DLG3Q92796 817 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 TMEM209Q96SK2 561 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SORT1Q99523 831 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PKMYT1Q99640 499 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PKP2Q99959 881 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 FAM110AQ9BQ89 295 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 EBF4Q9BQW3 602 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 IFT27Q9BW83 186 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 B3GNT5Q9BYG0 378 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CD244Q9BZW8 370 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF768Q9H5H4 540 aaKnown RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 IL21Q9HBE4 155 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 MMP25Q9NPA2 562 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SIRT7Q9NRC8 400 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ACSS1Q9NUB1 689 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 LYARQ9NX58 379 aaKnown RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PTTG3PQ9NZH4 202 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 MAP10Q9P2G4 905 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 KLQ9UEF7 1012 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 KIF25Q9UIL4 384 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SIX4Q9UIU6 781 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 KLHL21Q9UJP4 597 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SSR3Q9UNL2 185 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 WASF3Q9UPY6 502 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SLC5A6Q9Y289 635 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 BTBD3Q9Y2F9 522 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF451Q9Y4E5 1061 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PCDHGC4Q9Y5F7 938 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PCDHGA7Q9Y5G6 932 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 TNFRSF18Q9Y5U5 241 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 SPTBN4Q9H254 2564 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 TEX13DA0A0J9YY54 714 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 A0A1W2PQ27 194 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 A0A1W2PQ64 194 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 A0A1W2PQD8 194 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 TBC1D3FA6NER0 549 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SLC22A31A6NKX4 558 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SLC38A8A6NNN8 435 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 C9orf172C9J069 976 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 C1QTNF3-AMACRE9PGA6 284 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 STX16O14662 325 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CYP26A1O43174 497 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SSX4O60224 188 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 NME2P1O60361 137 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 NPHS1O60500 1241 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 VAMP5O95183 116 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 NFATC1O95644 943 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 MOCS2O96007 188 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SRPRAP08240 638 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF250P15622 560 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 HMGA1P17096 107 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ANXA7P20073 488 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 DGKAP23743 735 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 APEX1P27695 318 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CD6P30203 668 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SLC6A1P30531 599 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 S100A11P31949 105 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 DCTDP32321 178 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CD80P33681 288 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CD96P40200 585 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 P2RY2P41231 377 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 EIF1AXP47813 144 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms