RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 ZIC2O95409 532 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 OXSR1O95747 527 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 CBX7O95931 251 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 TFAP2AP05549 437 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 THBS1P07996 1170 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 IL7RP16871 459 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 CBLP22681 906 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 ELAVL4P26378 380 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 RYKP34925 604 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 CNR2P34972 360 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 POLR2IP36954 125 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 STT3AP46977 705 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 CLK3P49761 638 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 NR1H2P55055 460 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 HSD17B7P56937 341 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 NUP107P57740 925 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 POU6F2P78424 691 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 IL5RAQ01344 420 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 TOP3AQ13472 1001 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 SERTAD2Q14140 314 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 LARS2Q15031 903 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 EIPR1Q53HC9 387 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 DCST1Q5T197 706 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 DCST2Q5T1A1 773 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 RNF220Q5VTB9 566 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 TYW3Q6IPR3 259 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 TCTN3Q6NUS6 607 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 TMEM71Q6P5X7 295 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 DGAT2L6Q6ZPD8 337 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 TTLL10Q6ZVT0 673 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 HMGN2P46Q86SG4 172 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 COMTD1Q86VU5 262 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 VRK2Q86Y07 508 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 RBM45Q8IUH3 476 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 PEX5LQ8IYB4 626 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 ZNF619Q8N2I2 560 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC5A8Q8N695 610 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 FAM181AQ8N9Y4 354 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 AQP11Q8NBQ7 271 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 SIMC1Q8NDZ2 872 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 OR9Q2Q8NGE9 314 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 OR52P1PQ8NH57 321 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 OR51Q1Q8NH59 317 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 HDAC2Q92769 488 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 HOXB13Q92826 284 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 RIT1Q92963 219 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 NAT6Q93015 286 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 FKBP10Q96AY3 582 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 FEVQ99581 238 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 NDC1Q9BTX1 674 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 RSPO3Q9BXY4 272 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 ZNF350Q9GZX5 532 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 QRSL1Q9H0R6 528 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 GAREM1Q9H706 876 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 CXorf21Q9HAI6 301 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 CAPN10Q9HC96 672 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 NDUFA13Q9P0J0 144 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 RHCGQ9UBD6 479 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 NDOR1Q9UHB4 597 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 ENOPH1Q9UHY7 261 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 ACAD8Q9UKU7 415 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 BLOC1S6Q9UL45 172 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 A4GNTQ9UNA3 340 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 IFT52Q9Y366 437 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 MMACHCQ9Y4U1 282 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 HSPE1-MOB4S4R3N1 261 aa8.53□□□□□ -1.04
SMARCC1-208ENST00000492896 KMT2EQ8IZD2 1858 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 LY6G6EA0A0G2JKS1 128 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 TRBV4-1A0A0J9YWV2 114 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 EME2A4GXA9 379 aaPredicted RBP8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 TRIM64CA6NLI5 447 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 PCDH17O14917 1159 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 DSCR3O14972 297 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 KIAA0513O60268 411 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 PRAMEF2O60811 474 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 STX11O75558 287 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 SOX30O94993 753 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 NKX2-2O95096 273 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 EPPINO95925 133 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 ADAP00813 363 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 RPLP0P05388 317 aaKnown RBP8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 ANKRD34CP0C6C1 535 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 FOLR1P15328 257 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 FBLP22087 321 aaKnown RBP8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 RPS4Y1P22090 263 aaKnown RBP8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 ELK4P28324 431 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 GALNSP34059 522 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 MAP3K8P41279 467 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 GCGRP47871 477 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 HLCSP50747 726 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 UGT2B15P54855 530 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 CDH15P55291 814 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 RGS8P57771 180 aaPredicted RBP8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 TAS2R41P59536 307 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 GABARAPL2P60520 117 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 BTG2P78543 158 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 CD47Q08722 323 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 NPRL3Q12980 569 aa8.52□□□□□ -1.05
SMARCC1-208ENST00000492896 DUSP8Q13202 625 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms