RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CT45A8P0DMV1 189 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CT45A9P0DMV2 189 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PAX1P15863 534 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 EPB42P16452 691 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PTX3P26022 381 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PIK3R1P27986 724 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 SERPINB1P30740 379 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 TLX1P31314 330 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-223ENST00000473345 SLC6A8P48029 635 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 SLC12A2P55011 1212 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CLDN20P56880 219 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 GUCY2DQ02846 1103 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PLCXD2Q0VAA5 305 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 GALNT1Q10472 559 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-223ENST00000473345 MAP4K2Q12851 820 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PFKFB4Q16877 469 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 KBTBD12Q3ZCT8 623 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CT45A2Q5DJT8 189 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 LIPJQ5W064 366 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 HLA-DQA1Q5Y7H0 255 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CYP20A1Q6UW02 462 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 NUP54Q7Z3B4 507 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 IFNEQ86WN2 208 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PLCZ1Q86YW0 608 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 UBQLNLQ8IYU4 475 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PLD6Q8N2A8 252 aaKnown RBP8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CNEP1R1Q8N9A8 125 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 L3MBTL4Q8NA19 623 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 OR7G1Q8NGA0 311 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 OR4K14Q8NGD5 310 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 STAG3L4Q8TBR4 150 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 NEUROG1Q92886 237 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 TM4SF18Q96CE8 201 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CNRIP1Q96F85 164 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-223ENST00000473345 LCORQ96JN0 433 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-223ENST00000473345 FAM111AQ96PZ2 611 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CPNE1Q99829 537 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 MED18Q9BUE0 208 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 BRINP2Q9C0B6 783 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 ZDHHC18Q9NUE0 388 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 KLRF1Q9NZS2 232 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 WHRNQ9P202 907 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 NDRG3Q9UGV2 375 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 HEATR5AQ86XA9 2040 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 PRR14LQ5THK1 2151 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 DSCAMO60469 2012 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 CAPN14A8MX76 684 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SHISA8B8ZZ34 492 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 RNF223E7ERA6 249 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 FOXE1O00358 373 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 TO15178 435 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 NDUFS7O75251 213 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ERAL1O75616 437 aaKnown RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ATP1B1P05026 303 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 POU2F1P14859 743 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 PORP16435 677 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 NAGAP17050 411 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SRD5A2P31213 254 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 GP5P40197 560 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 PCYT1AP49585 367 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 TMED10P49755 219 aaKnown RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ARFIP1P53367 373 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 PPP2R2BQ00005 443 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF844Q08AG5 666 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 TRAF3Q13114 568 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 GTF2H2Q13888 395 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SF3B4Q15427 424 aaKnown RBP eCLIP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 C10orf62Q5T681 223 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SLC48A1Q6P1K1 146 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 GTF2H2CQ6P1K8 395 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ZDHHC24Q6UX98 284 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 NUDT13Q86X67 352 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 FADS6Q8N9I5 356 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 FNDC9Q8TBE3 224 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 RAB3IL1Q8TBN0 382 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 AENQ8WTP8 325 aaKnown RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 TSPAN17Q96FV3 270 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SLC35A4Q96G79 324 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SFXN2Q96NB2 322 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ADOQ96SZ5 270 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 IPPKQ9H8X2 491 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ACTR8Q9H981 624 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 RNF122Q9H9V4 155 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SAYSD1Q9NPB0 183 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 BCAP29Q9UHQ4 241 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ADGRE2Q9UHX3 823 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF225Q9UK10 706 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 DLGAP4Q9Y2H0 992 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 GPR55Q9Y2T6 319 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF337Q9Y3M9 751 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 PCDHGA11Q9Y5H2 935 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 PCDHA9Q9Y5H5 950 aa8.65□□□□□ -1.02
MCF2L-223ENST00000473345 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.02
MCF2L-223ENST00000473345 USF3Q68DE3 2245 aa8.65□□□□□ -1.03
MCF2L-223ENST00000473345 CR1P17927 2039 aa8.64□□□□□ -1.03
MCF2L-223ENST00000473345 ESYT3A0FGR9 886 aa8.64□□□□□ -1.03
MCF2L-223ENST00000473345 FRG2CA6NGY1 282 aa8.64□□□□□ -1.03
MCF2L-223ENST00000473345 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
MCF2L-223ENST00000473345 RNF212BA8MTL3 300 aa8.64□□□□□ -1.03
MCF2L-223ENST00000473345 SEMA3DO95025 777 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms