RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 MAP4K2Q12851 820 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 EXOSC7Q15024 291 aaKnown RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 SHBQ15464 509 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 TYW3Q6IPR3 259 aaKnown RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 B3GNT8Q7Z7M8 397 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 PEX5LQ8IYB4 626 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 VWA5B2Q8N398 1253 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 NR4A3Q92570 626 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 SDF2Q99470 211 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 ARHGDIGQ99819 225 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 PRTFDC1Q9NRG1 225 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 SCN3BQ9NY72 215 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 ZNF232Q9UNY5 417 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 SATB2Q9UPW6 733 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 MGAT4BQ9UQ53 548 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 TPRKBQ9Y3C4 175 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 A0A1W2PRQ8 180 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 PCDHGA12O60330 932 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 OR10H3O60404 316 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 COQ9O75208 318 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 FMO3P31513 532 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 TTKP33981 857 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 HSD11B2P80365 405 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 BNC1Q01954 994 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 DGCR6Q14129 220 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 SEC23BQ15437 767 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 NEDD8Q15843 81 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 PMS2CLQ68D20 193 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 Q6ZPB1 254 aaPredicted RBP17.69■□□□□ 0.42
USP39-202ENST00000409025 C11orf74Q86VG3 221 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 CCDC71Q8IV32 467 aaPredicted RBP17.69■□□□□ 0.42
USP39-202ENST00000409025 COX18Q8N8Q8 333 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 Q8N9G6 341 aaPredicted RBP17.69■□□□□ 0.42
USP39-202ENST00000409025 NMD3Q96D46 503 aaKnown RBP17.69■□□□□ 0.42
USP39-202ENST00000409025 RBM18Q96H35 190 aaKnown RBP17.69■□□□□ 0.42
USP39-202ENST00000409025 SNX5Q9Y5X3 404 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 PCDH15Q96QU1 1955 aa17.69■□□□□ 0.42
USP39-202ENST00000409025 PTGES3LE9PB15 166 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 H0YIG0 161 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 SEPHS1P49903 392 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 PMS2P3Q13401 168 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 KCNAB1Q14722 419 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 NR1D2Q14995 579 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 LARS2Q15031 903 aaKnown RBP17.68■□□□□ 0.42
USP39-202ENST00000409025 SYT16Q17RD7 645 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 PROX2Q3B8N5 592 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 DCST2Q5T1A1 773 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 KLHL17Q6TDP4 642 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 GALNT12Q8IXK2 581 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 ENTHD1Q8IYW4 607 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 LINC00471Q8N535 108 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 GPR151Q8TDV0 419 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 FUZQ9BT04 418 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 CXorf21Q9HAI6 301 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 PRMT8Q9NR22 394 aaPredicted RBP17.68■□□□□ 0.42
USP39-202ENST00000409025 RASSF1Q9NS23 344 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 SUSD2Q9UGT4 822 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 ZNF443Q9Y2A4 671 aaPredicted RBP17.68■□□□□ 0.42
USP39-202ENST00000409025 COMMD3-BMI1R4GMX3 469 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 SH3PXD2BA1X283 911 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 HRO43593 1189 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 XPNPEP2O43895 674 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 STX11O75558 287 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 CPNE6O95741 557 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 AK1P00568 194 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 JUNBP17275 347 aaPredicted RBP17.68■□□□□ 0.42
USP39-202ENST00000409025 UGT2B15P54855 530 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 IGLV3-21P80748 117 aaPredicted RBP17.68■□□□□ 0.42
USP39-202ENST00000409025 NPTX1Q15818 432 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 DGAT2L6Q6ZPD8 337 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 SPARTQ8N0X7 666 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 DEPDC4Q8N2C3 294 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 METTL27Q8N6F8 245 aaPredicted RBP17.68■□□□□ 0.42
USP39-202ENST00000409025 OR52R1Q8NGF1 315 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 FAM81AQ8TBF8 368 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 SLC7A13Q8TCU3 470 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 SGCDQ92629 289 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 RIT1Q92963 219 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 NODALQ96S42 347 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 TUBA1CQ9BQE3 449 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 ALOXE3Q9BYJ1 711 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 UCK2Q9BZX2 261 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 ZNF350Q9GZX5 532 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 AASSQ9UDR5 926 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 RSL24D1Q9UHA3 163 aaKnown RBP17.68■□□□□ 0.42
USP39-202ENST00000409025 RNF6Q9Y252 685 aa17.68■□□□□ 0.42
USP39-202ENST00000409025 DNAH14Q0VDD8 3507 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 LAMTOR5O43504 91 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 CDC123O75794 336 aaPredicted RBP17.67■□□□□ 0.42
USP39-202ENST00000409025 OR2B3O76000 313 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 SOX30O94993 753 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 CBX7O95931 251 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 GSSP48637 474 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 TAS2R41P59536 307 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 CFHR1Q03591 330 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 ZNF155Q12901 538 aaPredicted RBP17.67■□□□□ 0.42
USP39-202ENST00000409025 SRSF5Q13243 272 aaKnown RBP17.67■□□□□ 0.42
USP39-202ENST00000409025 ERV3-1Q14264 604 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 RAB39AQ14964 217 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 SNAP47Q5SQN1 464 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms