RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NUDT9Q9BW91 350 aa25.54■■□□□ 1.68
CPNE1-203ENST00000397442 RSPO3Q9BXY4 272 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-203ENST00000397442 RPS6KA6Q9UK32 745 aa25.54■■□□□ 1.68
CPNE1-203ENST00000397442 PTRH2Q9Y3E5 179 aaKnown RBP25.54■■□□□ 1.68
CPNE1-203ENST00000397442 H6PDO95479 791 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 ZNF682O95780 498 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 ARHGAP11BQ3KRB8 267 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 PRAMEF8Q5VWM4 474 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 PRAMEF7Q5VXH5 474 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 NPSR1Q6W5P4 371 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 C16orf62Q7Z3J2 963 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 CHDHQ8NE62 594 aaPredicted RBP25.53■■□□□ 1.68
CPNE1-203ENST00000397442 NFAM1Q8NET5 270 aaPredicted RBP25.53■■□□□ 1.68
CPNE1-203ENST00000397442 GPR151Q8TDV0 419 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 CT55Q8WUE5 264 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 SLC38A1Q9H2H9 487 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 POLR1BQ9H9Y6 1135 aa25.53■■□□□ 1.68
CPNE1-203ENST00000397442 CDV3Q9UKY7 258 aaKnown RBP25.53■■□□□ 1.68
CPNE1-203ENST00000397442 BRINP1O60477 761 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 GABRA3P34903 492 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 ELOAQ14241 798 aaKnown RBP25.52■■□□□ 1.68
CPNE1-203ENST00000397442 GNA13Q14344 377 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 GPAT3Q53EU6 434 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 TBCELQ5QJ74 424 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 TMPRSS7Q7RTY8 843 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 LILRA2Q8N149 483 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 ZSCAN1Q8NBB4 408 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 OR1N1Q8NGS0 311 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 PYURFQ96I23 114 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 ART5Q96L15 291 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 SLC46A1Q96NT5 459 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 ITPAQ9BY32 194 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 PRODH2Q9UF12 536 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 PPIEQ9UNP9 301 aaKnown RBP25.52■■□□□ 1.68
CPNE1-203ENST00000397442 DSPPQ9NZW4 1301 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 GXYLT2A0PJZ3 443 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 CT45A8P0DMV1 189 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 CT45A9P0DMV2 189 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 GABREP78334 506 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 CT45A2Q5DJT8 189 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 CPEB2Q7Z5Q1 589 aaKnown RBP25.52■■□□□ 1.68
CPNE1-203ENST00000397442 VTCN1Q7Z7D3 282 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 COX18Q8N8Q8 333 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 BBS10Q8TAM1 723 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 POP5Q969H6 163 aaKnown RBP25.52■■□□□ 1.68
CPNE1-203ENST00000397442 C8orf44Q96CB5 159 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 SDF2Q99470 211 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 UGT2B28Q9BY64 529 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 PCDHGB3Q9Y5G1 929 aa25.52■■□□□ 1.68
CPNE1-203ENST00000397442 GPC6Q9Y625 555 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-203ENST00000397442 A0A0G2JPF8 293 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 SAGE2PA6NJ88 616 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 HNRNPCL2B2RXH8 293 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 HNRNPCL3B7ZW38 293 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 FCMRO60667 390 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 MFN2O95140 757 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 BAG2O95816 211 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 RAB40ALP0C0E4 278 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 HNRNPCL4P0DMR1 293 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 TCN2P20062 427 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 SELENOWP63302 87 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 ZNHIT3Q15649 155 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-203ENST00000397442 SNCBQ16143 134 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 FAM98BQ52LJ0 330 aaKnown RBP25.51■■□□□ 1.67
CPNE1-203ENST00000397442 DCST2Q5T1A1 773 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 LRRC74BQ6ZQY2 392 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 GALNT15Q8N3T1 639 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 ESX1Q8N693 406 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 RNF145Q96MT1 663 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 RASSF4Q9H2L5 321 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 ADPRHL2Q9NX46 363 aa25.51■■□□□ 1.67
CPNE1-203ENST00000397442 LOC102723996A0A087X1L8 192 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 TIPRLO75663 272 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 SOX30O94993 753 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 SEMG1P04279 462 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 RAP2AP10114 183 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 ETS2P15036 469 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 CHRNEQ04844 493 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 SLC34A1Q06495 639 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 CCNJQ5T5M9 372 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 PAPD4Q6PIY7 484 aaKnown RBP25.5■■□□□ 1.67
CPNE1-203ENST00000397442 FRRS1Q6ZNA5 592 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 PQLC1Q8N2U9 271 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 OR4N2Q8NGD1 307 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 SLC47A1Q96FL8 570 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 HSH2DQ96JZ2 352 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 BTBD9Q96Q07 612 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 BTBD2Q9BX70 525 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 MAGIXQ9H6Y5 334 aa25.5■■□□□ 1.67
CPNE1-203ENST00000397442 GPR55Q9Y2T6 319 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-203ENST00000397442 SUV39H1O43463 412 aa25.49■■□□□ 1.67
CPNE1-203ENST00000397442 PDE9AO76083 593 aa25.49■■□□□ 1.67
CPNE1-203ENST00000397442 CD63P08962 238 aa25.49■■□□□ 1.67
CPNE1-203ENST00000397442 POU6F2P78424 691 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-203ENST00000397442 CHRNB3Q05901 458 aa25.49■■□□□ 1.67
CPNE1-203ENST00000397442 C9orf40Q8IXQ3 194 aa25.49■■□□□ 1.67
CPNE1-203ENST00000397442 NLGN4XQ8N0W4 816 aa25.49■■□□□ 1.67
CPNE1-203ENST00000397442 APCDD1LQ8NCL9 501 aa25.49■■□□□ 1.67
CPNE1-203ENST00000397442 NLGN4YQ8NFZ3 816 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-203ENST00000397442 COL21A1Q96P44 957 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms