RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 NPIPA2E9PIF3 369 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 NPIPA3F8WFD2 350 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 TRIM3O75382 744 aaPredicted RBP20.27■□□□□ 0.84
SRM-201ENST00000376957 TRAPPC6AO75865 159 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 DHRS4L1P0CG22 281 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 PNLIPRP2P54317 469 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 HSPB3Q12988 150 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 ART3Q13508 389 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 TOMM20Q15388 145 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 SMU1Q2TAY7 513 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 C6orf136Q5SQH8 315 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 TRIM42Q8IWZ5 723 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 SIMC1Q8NDZ2 872 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 CLHC1Q8NHS4 586 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 OSBPL11Q9BXB4 747 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 EXO1Q9UQ84 846 aaKnown RBP20.27■□□□□ 0.84
SRM-201ENST00000376957 COL12A1Q99715 3063 aa20.27■□□□□ 0.84
SRM-201ENST00000376957 UPK1AO00322 258 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 CLDN1O95832 211 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 PRPS1L1P21108 318 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 SOX18P35713 384 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 CLK3P49761 638 aaKnown RBP20.26■□□□□ 0.83
SRM-201ENST00000376957 SLC18A1P54219 525 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 DECR1Q16698 335 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 IL23RQ5VWK5 629 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 ATG16L1Q676U5 607 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 LARP4Q71RC2 724 aaKnown RBP eCLIP20.26■□□□□ 0.832e-7■■■□□ 15.6
SRM-201ENST00000376957 ITLN2Q8WWU7 325 aaPredicted RBP20.26■□□□□ 0.83
SRM-201ENST00000376957 SLC35A4Q96G79 324 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 PHF12Q96QT6 1004 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 RUBCNLQ9H714 662 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 ANKRA2Q9H9E1 313 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 PROK2Q9HC23 129 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 ARGLU1Q9NWB6 273 aaPredicted RBP20.26■□□□□ 0.83
SRM-201ENST00000376957 NOP53Q9NZM5 478 aaKnown RBP20.26■□□□□ 0.83
SRM-201ENST00000376957 KLF2Q9Y5W3 355 aaPredicted RBP20.26■□□□□ 0.83
SRM-201ENST00000376957 HECTD1Q9ULT8 2610 aa20.26■□□□□ 0.83
SRM-201ENST00000376957 TMEM120BA0PK00 339 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 PRAMEF25A6NGN4 478 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 HOXD4P09016 255 aaPredicted RBP20.25■□□□□ 0.83
SRM-201ENST00000376957 CT45A8P0DMV1 189 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 CT45A9P0DMV2 189 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 CORO7P57737 925 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 PRR5P85299 388 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 PDE7AQ13946 482 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 SF3B4Q15427 424 aaKnown RBP eCLIP20.25■□□□□ 0.83
SRM-201ENST00000376957 PDCD2Q16342 344 aaPredicted RBP20.25■□□□□ 0.83
SRM-201ENST00000376957 GXYLT1Q4G148 440 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 CT45A2Q5DJT8 189 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 CPTPQ5TA50 214 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 ANKRD26P1Q6NSI1 321 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 ACAD11Q709F0 780 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 SZRD1Q7Z422 152 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 CHERPQ8IWX8 916 aaKnown RBP20.25■□□□□ 0.83
SRM-201ENST00000376957 ZNF781Q8N8C0 355 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 HGDQ93099 445 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 ADOQ96SZ5 270 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 CHST11Q9NPF2 352 aa20.25■□□□□ 0.83
SRM-201ENST00000376957 USP9YO00507 2555 aaPredicted RBP20.25■□□□□ 0.83
SRM-201ENST00000376957 SPTBN1Q01082 2364 aaKnown RBP20.24■□□□□ 0.83
SRM-201ENST00000376957 NINQ8N4C6 2090 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 LRRC3CA6NJW4 275 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 PRSS44E7EML9 344 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 SCAMP2O15127 329 aaKnown RBP20.24■□□□□ 0.83
SRM-201ENST00000376957 ITM2AO43736 263 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 WDR1O75083 606 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 ICOSLGO75144 302 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 UGT2B11O75310 529 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 CBR3O75828 277 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 KCNH1O95259 989 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 RFPL3SP0C7P2 107 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 GABRA1P14867 456 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 BGNP21810 368 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 ARRB2P32121 409 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 MAGOHP61326 146 aaKnown RBP20.24■□□□□ 0.83
SRM-201ENST00000376957 EMX2Q04743 252 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 LSM12Q3MHD2 195 aaKnown RBP20.24■□□□□ 0.83
SRM-201ENST00000376957 TIGD3Q6B0B8 471 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 ZNF551Q7Z340 670 aaPredicted RBP20.24■□□□□ 0.83
SRM-201ENST00000376957 FGD2Q7Z6J4 655 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 GOLGA6L1Q8N7Z2 621 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 NEIL3Q8TAT5 605 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 CIDECQ96AQ7 238 aaPredicted RBP20.24■□□□□ 0.83
SRM-201ENST00000376957 ZBTB9Q96C00 473 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 C3orf30Q96M34 536 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 C1orf50Q9BV19 199 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 HHATLQ9HCP6 504 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 SDHAF3Q9NRP4 125 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 ATP6V1HQ9UI12 483 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 CBLCQ9ULV8 474 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 PCDHGB3Q9Y5G1 929 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 ICE1Q9Y2F5 2266 aa20.24■□□□□ 0.83
SRM-201ENST00000376957 FAM47E-STBD1D6RA91 191 aa20.23■□□□□ 0.83
SRM-201ENST00000376957 PRKAG1P54619 331 aa20.23■□□□□ 0.83
SRM-201ENST00000376957 PSG6Q00889 435 aa20.23■□□□□ 0.83
SRM-201ENST00000376957 CASP8Q14790 479 aa20.23■□□□□ 0.83
SRM-201ENST00000376957 MLC1Q15049 377 aa20.23■□□□□ 0.83
SRM-201ENST00000376957 BICRALQ6AI39 1079 aa20.23■□□□□ 0.83
SRM-201ENST00000376957 ZNF585AQ6P3V2 769 aa20.23■□□□□ 0.83
SRM-201ENST00000376957 ANGPTL8Q6UXH0 198 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms