RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ZNF140P52738 457 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 PSMA6P60900 246 aaKnown RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 PRAMEF9Q5VWM5 478 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 MZT2AQ6P582 158 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 TRIM40Q6P9F5 258 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 GDPGP1Q6ZNW5 385 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 C16orf59Q7L2K0 433 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 SERPINA9Q86WD7 417 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 RASGRP3Q8IV61 690 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CA5BP1Q8WTZ4 195 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 THAP4Q8WY91 577 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 MICU1Q9BPX6 476 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 SLC25A19Q9HC21 320 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 PRMT8Q9NR22 394 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 GSN-AS1Q9NRJ2 163 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 NLE1Q9NVX2 485 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 TRPS1Q9UHF7 1281 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 POP7O75817 140 aaKnown RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 ETHE1O95571 254 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 ECDO95905 644 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 RECKO95980 971 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 IGHA2P01877 340 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 IFNW1P05000 195 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 ANXA4P09525 319 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 GRK4P32298 578 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 RECQLP46063 649 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 PITPNBP48739 271 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 RAB13P51153 203 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 ZXDCQ2QGD7 858 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 MS4A13Q5J8X5 152 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CCNJQ5T5M9 372 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 PLBD1Q6P4A8 553 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CRTC1Q6UUV9 634 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 RPTNQ6XPR3 784 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 LURAP1LQ8IV03 231 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 SPRYD4Q8WW59 207 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 LRIG1Q96JA1 1093 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 ZNF285Q96NJ3 590 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 MAPKAP1Q9BPZ7 522 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 C1QTNF3Q9BXJ4 246 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 PLA2G12AQ9BZM1 189 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 RCE1Q9Y256 329 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CNTRLQ7Z7A1 2325 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 PLXNA1Q9UIW2 1896 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 MEIKINA0A087WXM9 373 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 SH3D21A4FU49 640 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 ARHGEF33A8MVX0 844 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CPEP16870 476 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 NFYAP23511 347 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 BTG1P62324 171 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CDK6Q00534 326 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CD276Q5ZPR3 534 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 C11orf88Q6PI97 169 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CORO6Q6QEF8 472 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 CCDC117Q8IWD4 279 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 PDZD9Q8IXQ8 264 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 NSMAFQ92636 917 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 ARSGQ96EG1 525 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 POPDC3Q9HBV1 291 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 THSD1Q9NS62 852 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 WSB2Q9NYS7 404 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 DHCR7Q9UBM7 475 aaKnown RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 SPEGQ15772 3267 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 MCM3APO60318 1980 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 LRIT2A6NDA9 550 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 M0R3H8 397 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 SEC14L5O43304 696 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 KCNAB3O43448 404 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 FRS3O43559 492 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 SIGLEC6O43699 453 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 BCHEP06276 602 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 HK1P19367 917 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 PTBP1P26599 531 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDT1-201ENST00000301019 SLC6A4P31645 630 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 IL10RBQ08334 325 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 HLXQ14774 488 aaPredicted RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 SGCAQ16586 387 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 DCST1Q5T197 706 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 GPR142Q7Z601 462 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 BBS1Q8NFJ9 593 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 OR10K1Q8NGX5 313 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 DPYSL5Q9BPU6 564 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 CINPQ9BW66 212 aaPredicted RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 SLC6A20Q9NP91 592 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 OR6C68A6NDL8 312 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 AMD1P17707 334 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 IL1RNP18510 177 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 TBXA2RP21731 343 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 AHRP35869 848 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 RNF144AP50876 292 aaPredicted RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 NAE1Q13564 534 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 ZNF792Q3KQV3 632 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 C3orf38Q5JPI3 329 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 QSOX2Q6ZRP7 698 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms