RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MMABQ96EY8 250 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-202ENST00000297979 NECAB3Q96P71 396 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-202ENST00000297979 ING2Q9H160 280 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SLC38A1Q9H2H9 487 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 ACER3Q9NUN7 267 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 DSPPQ9NZW4 1301 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 HTR3EA5X5Y0 456 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 BCKDKO14874 412 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
C9orf3-202ENST00000297979 UGT2B11O75310 529 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 LINGO3P0C6S8 592 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 CD1CP29017 333 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 POLR2IP36954 125 aaKnown RBP13.32□□□□□ -0.28
C9orf3-202ENST00000297979 LIMS1P48059 325 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 HMGA2P52926 109 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 EMP3P54852 163 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 MAT1AQ00266 395 aaKnown RBP13.32□□□□□ -0.28
C9orf3-202ENST00000297979 MICAQ29983 383 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 DOK4Q8TEW6 326 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 CCDC74AQ96AQ1 378 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 TMEM9Q9P0T7 183 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 CACNA1EQ15878 2313 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 HRO43593 1189 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 OR10H2O60403 315 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 ACP2P11117 423 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 RPL5P46777 297 aaKnown RBP13.32□□□□□ -0.28
C9orf3-202ENST00000297979 MGAT2Q10469 447 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 SLC13A2Q13183 592 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 SNAP47Q5SQN1 464 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 WDR74Q6RFH5 385 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF595Q8IYB9 648 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 PHF10Q8WUB8 498 aaKnown RBP13.32□□□□□ -0.28
C9orf3-202ENST00000297979 PINK1Q9BXM7 581 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 YTHDF1Q9BYJ9 559 aaKnown RBP13.32□□□□□ -0.28
C9orf3-202ENST00000297979 B3GNT4Q9C0J1 378 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 FAM192AQ9GZU8 254 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 SEMA5BQ9P283 1151 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 SLC9A8Q9Y2E8 581 aa13.32□□□□□ -0.28
C9orf3-202ENST00000297979 TMEM150CB9EJG8 249 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 H0YIG0 161 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PCDHGA12O60330 932 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 OR2B3O76000 313 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ALPPP05187 535 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 TFAP2AP05549 437 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CT62P0C5K7 136 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 TAGLNQ01995 201 aaKnown RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CHRNEQ04844 493 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 DUSP5Q16690 384 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 HLA-BQ31612 363 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 COLEC12Q5KU26 742 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF691Q5VV52 312 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 TCTN3Q6NUS6 607 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 DEF8Q6ZN54 512 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PRSS42Q7Z5A4 293 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 HMGN2P46Q86SG4 172 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 COMTD1Q86VU5 262 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 METTL27Q8N6F8 245 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 OR4D11Q8NGI4 311 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CTHRC1Q96CG8 243 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 FEVQ99581 238 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 GRIP2Q9C0E4 1043 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 QRSL1Q9H0R6 528 aaKnown RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 FSCN3Q9NQT6 498 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 RHCGQ9UBD6 479 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 TRIM64A6NGJ6 449 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 A8MVJ9 347 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CLDN4O14493 209 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 FFAR1O14842 300 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CTNSO60931 367 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PABPC4LP0CB38 370 aaKnown RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CYP4B1P13584 511 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ANXA8P13928 327 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PDX1P52945 283 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 SYT16Q17RD7 645 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 LIN52Q52LA3 116 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 FAM209AQ5JX71 171 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 EXOSC6Q5RKV6 272 aaKnown RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ARMC4Q5T2S8 1044 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 MLIPQ5VWP3 458 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ZCCHC12Q6PEW1 402 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 LACC1Q8IV20 430 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 TAGAPQ8N103 731 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 VWA5B2Q8N398 1253 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 D2HGDHQ8N465 521 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 SLC5A8Q8N695 610 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CDRT4Q8N9R6 151 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 SAP25Q8TEE9 199 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PIGUQ9H490 435 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PRTFDC1Q9NRG1 225 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ENAMQ9NRM1 1142 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PCDHGA8Q9Y5G5 932 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 H3BMH7 237 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 M0R3H8 397 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CDC123O75794 336 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CCNB2O95067 398 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 LGI1O95970 557 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ALOX5P09917 674 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 STX4Q12846 297 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms