RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Atg12Q9CQY1 141 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Arv1Q9D0U9 266 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Adat1Q9JHI2 499 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Il17dA0A0B4J1G4 205 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfp384E9Q1A5 584 aaKnown RBP9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn2r105E9Q3A5 860 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn2r42O35192 852 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Man2b2O54782 1018 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hoxc8P09025 242 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rph3aP47708 681 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 SmoP56726 793 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc37a3Q3TIT8 494 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sim1Q61045 765 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lasp1Q61792 263 aaKnown RBP9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Q8BHR8 331 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Itpk1Q8BYN3 419 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc5a11Q8K0E3 673 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Neto1Q8R4I7 533 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Smim14Q91VT8 99 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Msantd3Q9CR78 275 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cyp2u1Q9CX98 530 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 PigkQ9CXY9 395 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Dusp12Q9D0T2 339 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lpcat2bQ9D5U0 516 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 BvesQ9ES83 358 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ndrg2Q9QYG0 371 aaKnown RBP9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Asb3Q9WV72 525 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Wdr76A6PWY4 622 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Il20rbE9Q9A6 308 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 NlkO54949 527 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rbbp9O88851 186 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 DhfrP00375 187 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ifi204P0DOV2 619 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Capza1P47753 286 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gjb5Q02739 271 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hsf5Q5ND04 624 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 EdnraQ61614 427 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 AktipQ64362 292 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 ShbQ6PD21 503 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1318Q7TQW6 320 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Galnt7Q80VA0 657 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ahsa1Q8BK64 338 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sall4Q8BX22 1067 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cars2Q8BYM8 551 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Unc5dQ8K1S2 956 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Padi6Q8K3V4 682 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1317Q8VF84 316 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr807Q8VGI9 311 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cmtm8Q9CZR4 173 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lysmd1Q9D0E3 226 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Xylt2Q9EPL0 865 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem8aQ9ESN3 769 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Thsd1Q9JM61 851 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rab25Q9WTL2 213 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Kcnk7Q9Z2T1 307 aa9.46□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Unc13cQ8K0T7 2210 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pate1E9Q658 125 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Efna3O08545 230 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Actr1aP61164 376 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 AbatP61922 500 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Acta2P62737 377 aaKnown RBP9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Actg2P63268 376 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Fgf13P70377 245 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Glb1l2Q3UPY5 636 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Snx33Q4VAA7 574 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sgk494Q5SYL1 278 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Eid2Q6X7S9 236 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Q8BR90 294 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Actr1bQ8R5C5 376 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr850Q8VFF2 315 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr575Q8VH16 318 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tram1Q91V04 374 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 SvbpQ99LQ4 66 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfp773Q9CZ29 471 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ccdc167Q9D162 97 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rhox2aQ9D4Y3 191 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slco1a1Q9QXZ6 670 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Acox1Q9R0H0 661 aaKnown RBP9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ccdc166S4R181 449 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 VirmaA2AIV2 1811 aaKnown RBP9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ino80eA0A0U1RP99 260 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Trgv2A2J008 116 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 4930595M18RikA2RRY9 829 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Capn1O35350 713 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 VipP32648 170 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Malt1Q2TBA3 832 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Osbp2Q5QNQ6 908 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 P4ha2Q60716 537 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Six4Q61321 775 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cox8aQ64445 69 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gpr176Q80WT4 515 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zbtb37Q8C3U9 504 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 AcppQ8CE08 381 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cypt1Q8CH20 168 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gtf2f2Q8R0A0 249 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn1r219Q8R271 312 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn1r185Q8R299 319 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gipc3Q8R5M0 297 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Uhrf1Q8VDF2 782 aaKnown RBP9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ndufs4Q9CXZ1 175 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms