Protein–RNA interactions for Protein: Q8R5C5

Actr1b, Beta-centractin, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actr1bQ8R5C5 Gm25239-201ENSMUST00000174915 86 ntBASIC37.17■■■■□ 3.54
Actr1bQ8R5C5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Actr1bQ8R5C5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Actr1bQ8R5C5 Gm15042-201ENSMUST00000120212 883 ntBASIC32.6■■■□□ 2.81
Actr1bQ8R5C5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Actr1bQ8R5C5 Gm24109-201ENSMUST00000175489 103 ntBASIC32.13■■■□□ 2.73
Actr1bQ8R5C5 Gm15045-201ENSMUST00000117359 883 ntBASIC31.86■■■□□ 2.69
Actr1bQ8R5C5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Actr1bQ8R5C5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Actr1bQ8R5C5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Actr1bQ8R5C5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Actr1bQ8R5C5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Actr1bQ8R5C5 Gm23366-201ENSMUST00000175022 89 ntBASIC31.08■■■□□ 2.57
Actr1bQ8R5C5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Actr1bQ8R5C5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Actr1bQ8R5C5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Actr1bQ8R5C5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.36■■■□□ 2.45
Actr1bQ8R5C5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Actr1bQ8R5C5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Actr1bQ8R5C5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Actr1bQ8R5C5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.95■■■□□ 2.39
Actr1bQ8R5C5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Actr1bQ8R5C5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
Actr1bQ8R5C5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Actr1bQ8R5C5 Psd-208ENSMUST00000224556 2034 ntBASIC29.86■■■□□ 2.37
Actr1bQ8R5C5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Actr1bQ8R5C5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Actr1bQ8R5C5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.78■■■□□ 2.36
Actr1bQ8R5C5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.66■■■□□ 2.34
Actr1bQ8R5C5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.64■■■□□ 2.34
Actr1bQ8R5C5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Actr1bQ8R5C5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Actr1bQ8R5C5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Actr1bQ8R5C5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Actr1bQ8R5C5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.29■■■□□ 2.28
Actr1bQ8R5C5 Gm25238-201ENSMUST00000174914 89 ntBASIC29.28■■■□□ 2.28
Actr1bQ8R5C5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.19■■■□□ 2.26
Actr1bQ8R5C5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Actr1bQ8R5C5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Actr1bQ8R5C5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Actr1bQ8R5C5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Actr1bQ8R5C5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Actr1bQ8R5C5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
Actr1bQ8R5C5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Actr1bQ8R5C5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.67■■■□□ 2.18
Actr1bQ8R5C5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.67■■■□□ 2.18
Actr1bQ8R5C5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Actr1bQ8R5C5 Gm27325-201ENSMUST00000175467 74 ntBASIC28.57■■■□□ 2.16
Actr1bQ8R5C5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Actr1bQ8R5C5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Actr1bQ8R5C5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Actr1bQ8R5C5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.42■■■□□ 2.14
Actr1bQ8R5C5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.41■■■□□ 2.14
Actr1bQ8R5C5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.32■■■□□ 2.12
Actr1bQ8R5C5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
Actr1bQ8R5C5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.26■■■□□ 2.11
Actr1bQ8R5C5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Actr1bQ8R5C5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Actr1bQ8R5C5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Actr1bQ8R5C5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Actr1bQ8R5C5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.03■■■□□ 2.08
Actr1bQ8R5C5 Gm25262-201ENSMUST00000174934 133 ntBASIC28.03■■■□□ 2.08
Actr1bQ8R5C5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Actr1bQ8R5C5 Rab21-202ENSMUST00000218831 843 ntBASIC28■■■□□ 2.07
Actr1bQ8R5C5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Actr1bQ8R5C5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Actr1bQ8R5C5 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.94■■■□□ 2.06
Actr1bQ8R5C5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Actr1bQ8R5C5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.91■■■□□ 2.06
Actr1bQ8R5C5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Actr1bQ8R5C5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Actr1bQ8R5C5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Actr1bQ8R5C5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Actr1bQ8R5C5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Actr1bQ8R5C5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.78■■■□□ 2.04
Actr1bQ8R5C5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Actr1bQ8R5C5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Actr1bQ8R5C5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Actr1bQ8R5C5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Actr1bQ8R5C5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.65■■■□□ 2.02
Actr1bQ8R5C5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Actr1bQ8R5C5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Actr1bQ8R5C5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.59■■■□□ 2.01
Actr1bQ8R5C5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Actr1bQ8R5C5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.57■■■□□ 2
Actr1bQ8R5C5 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.56■■■□□ 2
Actr1bQ8R5C5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Actr1bQ8R5C5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.54■■■□□ 2
Actr1bQ8R5C5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.48■■□□□ 1.99
Actr1bQ8R5C5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Actr1bQ8R5C5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.44■■□□□ 1.98
Actr1bQ8R5C5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Actr1bQ8R5C5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Actr1bQ8R5C5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Actr1bQ8R5C5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Actr1bQ8R5C5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Actr1bQ8R5C5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.29■■□□□ 1.96
Actr1bQ8R5C5 Gm26115-201ENSMUST00000175605 87 ntBASIC27.28■■□□□ 1.96
Actr1bQ8R5C5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Actr1bQ8R5C5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.22■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms