RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PTPRNQ16849 979 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SYTL3Q4VX76 610 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 C6orf136Q5SQH8 315 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CHRDL2Q6WN34 429 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 Q6ZSR9 355 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PDZD3Q86UT5 571 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 LDLRAD3Q86YD5 345 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 LNX2Q8N448 690 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PXT1Q8NFP0 134 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 C2CD4CQ8TF44 421 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 LINGO1Q96FE5 620 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 FAM193BQ96PV7 902 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 UBL7Q96S82 380 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 DDOQ99489 341 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 NEU1Q99519 415 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 TSNAXQ99598 290 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CPPED1Q9BRF8 314 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 C7orf50Q9BRJ6 194 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 EDEM2Q9BV94 578 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 KATNB1Q9BVA0 655 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 HDHD2Q9H0R4 259 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 WNT5BQ9H1J7 359 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ABCG5Q9H222 651 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 TCF7L1Q9HCS4 588 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 NLE1Q9NVX2 485 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 MARCH2Q9P0N8 246 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 GHRLQ9UBU3 117 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 FKBPLQ9UIM3 349 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PLEKHA6Q9Y2H5 1048 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 HTTP42858 3142 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PLXNA4Q9HCM2 1894 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 POM121CA8CG34 1229 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 IQCF5A8MTL0 148 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 PSMD9O00233 223 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 STK25O00506 426 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 FFAR3O14843 346 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 GPR42O15529 346 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SSNA1O43805 119 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 PRKYO43930 277 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 RBBP9O75884 186 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 KRT33AO76009 404 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 IFNA10P01566 189 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 IFNGP01579 166 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 IGLV3-27P01718 113 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 TCRBP04435 133 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CRYBA1P05813 215 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 GIPP09681 153 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ANXA8P13928 327 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CD53P19397 219 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 PAX6P26367 422 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 MAPK3P27361 379 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SLC6A4P31645 630 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 IDH2P48735 452 aaKnown RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 RNF144AP50876 292 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CTSCP53634 463 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ZP1P60852 638 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CDC42P60953 191 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SNRPEP62304 92 aaKnown RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SLC3A1Q07837 685 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 HLXQ14774 488 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SMCO1Q147U7 214 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SEC23BQ15437 767 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 GSG1Q2KHT4 349 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ACER2Q5QJU3 275 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 C10orf120Q5SQS8 335 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 LHX8Q68G74 356 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ZC3H14Q6PJT7 736 aaKnown RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 MSRB3Q8IXL7 192 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SLC44A3Q8N4M1 653 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 NANOGP1Q8N7R0 232 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 AKR7LQ8NHP1 331 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CD200R1Q8TD46 325 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 EEF1AKMT1Q8WVE0 214 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CNOT9Q92600 299 aaKnown RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 NELL2Q99435 816 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 SSX3Q99909 188 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 INPP5KQ9BT40 448 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 C1QTNF3Q9BXJ4 246 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ENKD1Q9H0I2 346 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 IKZF5Q9H5V7 419 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 NSUN3Q9H649 340 aaKnown RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CHMP1AQ9HD42 196 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CLN6Q9NWW5 311 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 TAS2R13Q9NYV9 303 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 AKAP7Q9P0M2 348 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 PRG3Q9Y2Y8 225 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 Q9Y3F1 56 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 DNMT3AQ9Y6K1 912 aaPredicted RBP7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 MCRIP1C9JLW8 97 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 NDUFS3O75489 264 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 VNN2O95498 520 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF682O95780 498 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 ALDOBP05062 364 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 URODP06132 367 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 COX5BP10606 129 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 TACR2P21452 398 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 CTGFP29279 349 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 RAP2BP61225 183 aa7.09□□□□□ -1.27
TRIM49B-202ENST00000622138 TNFRSF17Q02223 184 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms