RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 JUNBP17275 347 aaPredicted RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 EEFSECP57772 596 aaKnown RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 HTR4Q13639 388 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 DPY19L1Q2PZI1 675 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 CASP12Q6UXS9 341 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 EIF3MQ7L2H7 374 aaKnown RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 LSMEM1Q8N8F7 131 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 C11orf65Q8NCR3 313 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 HMGCLL1Q8TB92 370 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 DYNC2LI1Q8TCX1 351 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ZNF624Q9P2J8 865 aaPredicted RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 NLKQ9UBE8 527 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ATPIF1Q9UII2 106 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ABCA4P78363 2273 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 CEP295Q9C0D2 2601 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 A0A1B0GTL3 188 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 A0A1W2PQ09 198 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 WWP2O00308 870 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 LIPAP38571 399 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 CHRNEQ04844 493 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 RUNDC3AQ59EK9 446 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 PRAMEF17Q5VTA0 474 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 BLOC1S3Q6QNY0 202 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 TMEM107Q6UX40 140 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 LARP4Q71RC2 724 aaKnown RBP eCLIP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 LRRC70Q7Z2Q7 622 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 B3GNT8Q7Z7M8 397 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 LRRC17Q8N6Y2 441 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ZNF607Q96SK3 696 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 DPCDQ9BVM2 203 aaPredicted RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 HDHD5Q9BXW7 423 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 SPRTNQ9H040 489 aaPredicted RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ANKRD10Q9NXR5 420 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 FZD4Q9ULV1 537 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 FAM92AA1XBS5 289 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 MCIDASD6RGH6 385 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 G3V3Y1 287 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 NR2F6P10588 404 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 IL32P24001 234 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ITGA3P26006 1051 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 CCKBRP32239 447 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 IGFALSP35858 605 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 DCTP40126 519 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 RPA4Q13156 261 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 IL18Q14116 193 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 TIMM50Q3ZCQ8 353 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 SLC36A4Q6YBV0 504 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ASB18Q6ZVZ8 466 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 RNF130Q86XS8 419 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 PLXDC1Q8IUK5 500 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 SFTPA2Q8IWL1 248 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ZNF683Q8IZ20 524 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 MAL2Q969L2 176 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 TMEM185BQ9H7F4 350 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ACOT13Q9NPJ3 140 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 CLEC1BQ9P126 229 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 ING4Q9UNL4 249 aa10.26□□□□□ -0.77
FAM3A-221ENST00000612856 PDCD11Q14690 1871 aaKnown RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 CIB4A0PJX0 185 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 CH25HO95992 272 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PLATP00750 562 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 EBLN1P0CF75 366 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PAICSP22234 425 aaKnown RBP10.25□□□□□ -0.77
FAM3A-221ENST00000612856 SGCBQ16585 318 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 ZNF730Q6ZMV8 503 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 HDDC2Q7Z4H3 204 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 SPATA19Q7Z5L4 167 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 SLC37A3Q8NCC5 494 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 BCL7BQ9BQE9 202 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PRTFDC1Q9NRG1 225 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 GPR83Q9NYM4 423 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 CLEC4AQ9UMR7 237 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 SPTBN4Q9H254 2564 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PTPN13Q12923 2485 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 ARPC4-TTLL3A0A0A6YYG9 625 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 ERVH48-1M5A8F1 160 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 UBFD1O14562 309 aaKnown RBP10.25□□□□□ -0.77
FAM3A-221ENST00000612856 CDC40O60508 579 aaKnown RBP eCLIP10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PRMT3O60678 531 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PRPS2P11908 318 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 BMP7P18075 431 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 RBMS1P29558 406 aaKnown RBP10.25□□□□□ -0.77
FAM3A-221ENST00000612856 RPE65Q16518 533 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 UXS1Q8NBZ7 420 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 SMRP1Q8NCR6 262 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 SIMC1Q8NDZ2 872 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 ZNF675Q8TD23 568 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 RHBDF1Q96CC6 855 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 C1GALT1C1Q96EU7 318 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 TPT1P8Q9HAU6 139 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 TAS2R16Q9NYV7 291 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PRR23D1E9PI22 279 aaPredicted RBP10.25□□□□□ -0.77
FAM3A-221ENST00000612856 IGLV3-27P01718 113 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PDGFAP04085 211 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
FAM3A-221ENST00000612856 CKMT1AP12532 417 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 RPL3P39023 403 aaKnown RBP10.25□□□□□ -0.77
FAM3A-221ENST00000612856 GCNT6Q5T4J0 391 aa10.25□□□□□ -0.77
FAM3A-221ENST00000612856 FAM69BQ5VUD6 431 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms