RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ASCC1Q8N9N2 400 aaKnown RBP12.31□□□□□ -0.44
USB1-207ENST00000563149 SLC7A6Q92536 515 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 TM9SF4Q92544 642 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 ZC3HAV1LQ96H79 300 aaKnown RBP12.31□□□□□ -0.44
USB1-207ENST00000563149 FRMD6Q96NE9 622 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 DEPDC7Q96QD5 511 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 SOSTQ9BQB4 213 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 DEC1Q9P2X7 70 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 SLC13A4Q9UKG4 626 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 LIPT1Q9Y234 373 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 PCDHGB7Q9Y5F8 929 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 FAM170BA6NMN3 283 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 AP3D1O14617 1153 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 EMC8O43402 210 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 NFATC1O95644 943 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 YES1P07947 543 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 GALP22466 123 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 TEAD1P28347 426 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 P2RY2P41231 377 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 TSFMP43897 325 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 GJA8P48165 433 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 TAS2R41P59536 307 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 RPS25P62851 125 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 MRPS15P82914 257 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 PRR5P85299 388 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 RIN1Q13671 783 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 DSG2Q14126 1118 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ZNF234Q14588 700 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 GPAT3Q53EU6 434 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ZNF793Q6ZN11 406 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 RRM2BQ7LG56 351 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 LINC01555Q8NAE3 123 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 POGLUT1Q8NBL1 392 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ZNF485Q8NCK3 441 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 SRFBP1Q8NEF9 429 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 TOR1AIP2Q8NFQ8 470 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 LILRB4Q8NHJ6 448 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 SLC9A6Q92581 669 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 OSTF1Q92882 214 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 UCN3Q969E3 161 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 LRRC3BQ96PB8 259 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 FERD3LQ96RJ6 166 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 SLX1AQ9BQ83 275 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 JAM3Q9BX67 310 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 C11orf54Q9H0W9 315 aaPredicted RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 SLA2Q9H6Q3 261 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 RNF121Q9H920 327 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ENTPD4Q9Y227 616 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 EXOGQ9Y2C4 368 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 ASB4Q9Y574 426 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 PTPRSQ13332 1948 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 B4DXG7 233 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 SCO2O43819 266 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 HMGN2P05204 90 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 LIMS3P0CW19 117 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 LIMS4P0CW20 117 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 CSNK2A2P19784 350 aaPredicted RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 MYL9P24844 172 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 AHRP35869 848 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 TGM4P49221 684 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 CLCNKAP51800 687 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 PRKAG1P54619 331 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ABATP80404 500 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 SLAMF1Q13291 335 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 LASP1Q14847 261 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 AGERQ15109 404 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 QPRTQ15274 297 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 TAB1Q15750 504 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 GPR19Q15760 415 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ZNF311Q5JNZ3 666 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 C1QTNF12Q5T7M4 302 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 OR2G6Q5TZ20 316 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 MZT2AQ6P582 158 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 PRICKLE2Q7Z3G6 844 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 GATAD2AQ86YP4 633 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 OR2A1Q8NGT9 310 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 OR2L8Q8NGY9 312 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 PIGXQ8TBF5 258 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 DIO2Q92813 273 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 TMEM203Q969S6 136 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 C17orf62Q9BQA9 187 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 SARGQ9BW04 601 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 PLA2G12AQ9BZM1 189 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 EGLN3Q9H6Z9 239 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 KLHL28Q9NXS3 571 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 ADAM30Q9UKF2 790 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 POLHQ9Y253 713 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 CARD8Q9Y2G2 431 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 MRPS23Q9Y3D9 190 aaKnown RBP12.3□□□□□ -0.44
USB1-207ENST00000563149 INSL6Q9Y581 213 aa12.3□□□□□ -0.44
USB1-207ENST00000563149 HTTP42858 3142 aa12.29□□□□□ -0.44
USB1-207ENST00000563149 GSAPA4D1B5 854 aa12.29□□□□□ -0.44
USB1-207ENST00000563149 PROM1O43490 865 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms