RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ERVK-18Q9QC07 812 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 GLS2Q9UI32 602 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 FBXO4Q9UKT5 387 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 LAMP3Q9UQV4 416 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 RUVBL2Q9Y230 463 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 RCE1Q9Y256 329 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 DNAJC15Q9Y5T4 150 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 FKBP7Q9Y680 259 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 STON1Q9Y6Q2 735 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 AP1M2Q9Y6Q5 423 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 MYO18AQ92614 2054 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 ZNF638Q14966 1978 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 MIA3Q5JRA6 1907 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 RLFQ13129 1914 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 A0A1W2PQ09 198 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 C7orf66A4D0T2 115 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TMEM150BA6NC51 233 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PRR23AA6NEV1 266 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 NEMP2A6NFY4 417 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CD8B2A6NJW9 211 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 FAM220BPB1ANY3 271 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 MCIDASD6RGH6 385 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ATP6V1G2-DDX39BF2Z307 99 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 F5H423 210 aaPredicted RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 H0YC42 278 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 K7ERI5 159 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ABCD4O14678 606 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 SLC30A4O14863 429 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TFECO14948 347 aaPredicted RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 AZIN1O14977 448 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 OGTO15294 1046 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 NCAM2O15394 837 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PSMD3O43242 534 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 SLC7A4O43246 635 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ARHGEF9O43307 516 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 KLK8O60259 260 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 HCN1O60741 890 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PTP4A3O75365 173 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ZNF254O75437 659 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 OAZ2O95190 189 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 FADS2O95864 444 aaKnown RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 OLFM2O95897 454 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PAHP00439 452 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 IFNA16P05015 189 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ICAM1P05362 532 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 LCKP06239 509 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CDK1P06493 297 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TPOP07202 933 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CAPN1P07384 714 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TGFB3P10600 412 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 HOXB2P14652 356 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PDGFRAP16234 1089 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 NCK1P16333 377 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 HOXB8P17481 243 aaPredicted RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 ALOX12P18054 663 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 GABRB1P18505 474 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ITGB6P18564 788 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ATF6P18850 670 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 MSH3P20585 1137 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CD9P21926 228 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CBLP22681 906 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 BDNFP23560 247 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 GADD45AP24522 165 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 MYL9P24844 172 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PTPN3P26045 913 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PTBP1P26599 531 aaKnown RBP eCLIP3.04□□□□□ -1.924e-8■■■■■ 27.3
HERC1-203ENST00000558532 NMBRP28336 390 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TNFSF8P32971 234 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 SOX6P35712 828 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TGFBR1P36897 503 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CLK1P49759 484 aaKnown RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 GZMMP51124 257 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CLCN3P51790 818 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CLCNKAP51800 687 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 MAPK12P53778 367 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 HSPA2P54652 639 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 AIF1P55008 147 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TPD52P55327 224 aaPredicted RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 CLDN20P56880 219 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 HERVK_113P63132 956 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ERVK-8P63133 956 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PSPHP78330 225 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 TSPY1Q01534 308 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 RHAGQ02094 409 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 UBE3AQ05086 875 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 ZNF33BQ06732 778 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 SCN1BQ07699 218 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 FOXO1Q12778 655 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CDH17Q12864 832 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 IKQ13123 557 aaPredicted RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 GNA13Q14344 377 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 CAPRIN1Q14444 709 aaKnown RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 NFE2L1Q14494 772 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 PRPSAP1Q14558 356 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 MXD4Q14582 209 aaPredicted RBP3.04□□□□□ -1.92
HERC1-203ENST00000558532 ZNF273Q14593 569 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 EMC2Q15006 297 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 KIAA0040Q15053 153 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 AANATQ16613 207 aa3.04□□□□□ -1.92
HERC1-203ENST00000558532 MICAQ29983 383 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms