RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TEFQ10587 303 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 GLYR1Q49A26 553 aaPredicted RBP2.5□□□□□ -2.01
CCDC38-204ENST00000546816 AARDQ4LEZ3 155 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 EPC2Q52LR7 807 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 CDC42EP5Q6NZY7 148 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 B3GLCTQ6Y288 498 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 KCTD9Q7L273 389 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 PIWIL3Q7Z3Z3 882 aaKnown RBP2.5□□□□□ -2.01
CCDC38-204ENST00000546816 ANKRD23Q86SG2 305 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 ERI1Q8IV48 349 aaKnown RBP2.5□□□□□ -2.01
CCDC38-204ENST00000546816 CHCHD4Q8N4Q1 142 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 COLGALT1Q8NBJ5 622 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 BCL2L2Q92843 193 aaPredicted RBP2.5□□□□□ -2.01
CCDC38-204ENST00000546816 SLC25A38Q96DW6 304 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 MRPL53Q96EL3 112 aaKnown RBP2.5□□□□□ -2.01
CCDC38-204ENST00000546816 C2orf40Q9H1Z8 148 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 NRN1Q9NPD7 142 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 DIMT1Q9UNQ2 313 aaKnown RBP2.5□□□□□ -2.01
CCDC38-204ENST00000546816 FLVCR1Q9Y5Y0 555 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 SYNJ2O15056 1496 aa2.5□□□□□ -2.01
CCDC38-204ENST00000546816 SLC28A1O00337 649 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 LCMT2O60294 686 aaKnown RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 CENPBP07199 599 aaPredicted RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 GLULP15104 373 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 FUT3P21217 361 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 IGHV1-2P23083 117 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 RPA1P27694 616 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 CTNNB1P35222 781 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 TSTA3Q13630 321 aaPredicted RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 KYAT1Q16773 422 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 TCHHL1Q5QJ38 904 aaPredicted RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 SPATA46Q5T0L3 261 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 PRAMEF8Q5VWM4 474 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 HIST2H2AA3Q6FI13 130 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 IRGCQ6NXR0 463 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 ATRAIDQ6UW56 229 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 RANBP3LQ86VV4 465 aaPredicted RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 STHQ8IWL8 128 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 TMCO5AQ8N6Q1 288 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 FNDC8Q8TC99 324 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 FAM46BQ96A09 425 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 EEF2KMTQ96G04 330 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 JAKMIP1Q96N16 626 aaKnown RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 PLEKHF1Q96S99 279 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 JPH2Q9BR39 696 aaPredicted RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 FAM213AQ9BRX8 229 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 DPH7Q9BTV6 452 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 HCAR1Q9BXC0 346 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 TRPV6Q9H1D0 765 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 OPN3Q9H1Y3 402 aaPredicted RBP2.49□□□□□ -2.01
CCDC38-204ENST00000546816 TMEM245Q9H330 911 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 KCNMB3Q9NPA1 279 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 ERVK-18Q9QC07 812 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 KLK12Q9UKR0 248 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 STX8Q9UNK0 236 aa2.49□□□□□ -2.01
CCDC38-204ENST00000546816 SH2D1BO14796 132 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 PDE5AO76074 875 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 ALOX5P09917 674 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 HIST1H2AGP0C0S8 130 aaPredicted RBP2.48□□□□□ -2.01
CCDC38-204ENST00000546816 CCDC166P0CW27 439 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 CASP3P42574 277 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 ACADSBP45954 432 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 KIAA1024LP59773 190 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 RPS8P62241 208 aaKnown RBP2.48□□□□□ -2.01
CCDC38-204ENST00000546816 GK2Q14410 553 aaPredicted RBP2.48□□□□□ -2.01
CCDC38-204ENST00000546816 SLMAPQ14BN4 828 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 HERPUD1Q15011 391 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 ZIC1Q15915 447 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 PRR4Q16378 134 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 SMU1Q2TAY7 513 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 HKDC1Q2TB90 917 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.48□□□□□ -2.01
CCDC38-204ENST00000546816 RFESDQ8TAC1 157 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 SRSF12Q8WXF0 261 aaKnown RBP2.48□□□□□ -2.01
CCDC38-204ENST00000546816 HIST1H2ACQ93077 130 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 RAB39BQ96DA2 213 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 GPR137Q96N19 417 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 FUNDC2Q9BWH2 189 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 CACNG6Q9BXT2 260 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 HPS4Q9NQG7 708 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 COMMD8Q9NX08 183 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 SLC2A6Q9UGQ3 507 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 FBXW2Q9UKT8 454 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 PDE10AQ9Y233 779 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 SLC9A8Q9Y2E8 581 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 PTPRUQ92729 1446 aa2.48□□□□□ -2.01
CCDC38-204ENST00000546816 FAM170AA1A519 330 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 PDLIM1O00151 329 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 EEF2KO00418 725 aaKnown RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 REC8O95072 547 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 HOXB7P09629 217 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 MAT2AP31153 395 aaKnown RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 TNNT3P45378 269 aaPredicted RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 OR3A4PP47883 348 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 METAP1P53582 386 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 UCP2P55851 309 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 CCZ1BP86790 482 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 CCZ1P86791 482 aaPredicted RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 SMC1AQ14683 1233 aaKnown RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 EXOSC7Q15024 291 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms