RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CD244Q9BZW8 370 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 SLC38A1Q9H2H9 487 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 PCIF1Q9H4Z3 704 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 TASP1Q9H6P5 420 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 NMNAT1Q9HAN9 279 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ZFP64Q9NPA5 681 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ACOT13Q9NPJ3 140 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 MIEF1Q9NQG6 463 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ACSS2Q9NR19 701 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 EIF2B3Q9NR50 452 aaKnown RBP4.11□□□□□ -1.75
SNHG1-219ENST00000542112 SIRT7Q9NRC8 400 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 RXFP3Q9NSD7 469 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 TMEM184CQ9NVA4 438 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 SPATA6Q9NWH7 488 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-219ENST00000542112 PARPBPQ9NWS1 579 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 KLHL28Q9NXS3 571 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 SERGEFQ9UGK8 458 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 SLC25A13Q9UJS0 675 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ING1Q9UK53 422 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF490Q9ULM2 529 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-219ENST00000542112 OAZ3Q9UMX2 235 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 WASF3Q9UPY6 502 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 RNF6Q9Y252 685 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 RAP2CQ9Y3L5 183 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 MMACHCQ9Y4U1 282 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 PCDHGA7Q9Y5G6 932 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 B3GALT1Q9Y5Z6 326 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ATP23Q9Y6H3 246 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ECM29Q5VYK3 1845 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ATRNL1Q5VV63 1379 aa4.11□□□□□ -1.75
SNHG1-219ENST00000542112 ARAP2Q8WZ64 1704 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TNS1Q9HBL0 1735 aaKnown RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 MEIKINA0A087WXM9 373 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 FAM240BA0A1B0GVZ2 78 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 A0A1W2PQ09 198 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 METTL21EPA6NDL7 271 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TBC1D3BA6NDS4 549 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 C5orf51A6NDU8 294 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TBC1D3FA6NER0 549 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 POM121BA6NF01 834 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 FAM74A7A6NL05 159 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ERI2A8K979 691 aaKnown RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 B4E171 279 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 DISC1C4P0D8 188 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 LRRN3E7EW58 273 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 INMT-MINDY4F8WBC2 141 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 K7ERI5 159 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 QSOX1O00391 747 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 MEIS2O14770 477 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 DSCR3O14972 297 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 CFLARO15519 480 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 CHST10O43529 356 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 PSPNO60542 156 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 HPGDSO60760 199 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 PRAF2O60831 178 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TMEM127O75204 238 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 RDH16O75452 317 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 RGS11O94810 467 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 SORBS2O94875 1100 aaKnown RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 GLCEO94923 617 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 NXPH2O95156 264 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ZBTB7AO95365 584 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 FADS2O95864 444 aaKnown RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 MOCS2O96007 188 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 EGFP01133 1207 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 CYBBP04839 570 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 CRYBA1P05813 215 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 FGF3P11487 239 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 NR2C1P13056 603 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 INSRRP14616 1297 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 PPP3CBP16298 524 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 UGT2B7P16662 529 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TPH1P17752 444 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 PFKLP17858 780 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 CERS1P27544 350 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 PSMB9P28065 219 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 HTR2AP28223 471 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 LCN1P31025 176 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TNFSF8P32971 234 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 MPIP34949 423 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 AHRP35869 848 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TGFBR2P37173 567 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ALDH3B1P43353 468 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 MAGEB1P43366 347 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 KCNJ1P48048 391 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 KCNJ3P48549 501 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 SLC11A2P49281 568 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 RORCP51449 518 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF81P51508 661 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 CLCN3P51790 818 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ACLYP53396 1101 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 CDH11P55287 796 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ITGA1P56199 1179 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 WNT4P56705 351 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF280AP59817 542 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 ISL1P61371 349 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 NCS1P62166 190 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 MRPS11P82912 194 aaKnown RBP4.1□□□□□ -1.75
SNHG1-219ENST00000542112 DEFA5Q01523 94 aa4.1□□□□□ -1.75
SNHG1-219ENST00000542112 TFCP2Q12800 502 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms