RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 WRBO00258 174 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 ZNF195O14628 629 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 ARPC2O15144 300 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 CTDSPLO15194 276 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 MAGEB2O15479 319 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 ZNF264O43296 627 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 CSO75390 466 aaKnown RBP5.07□□□□□ -1.6
PCF11-202ENST00000528336 CHRNA1P02708 482 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 TPM3P06753 285 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 CAPN1P07384 714 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 ASNSP08243 561 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 MMP10P09238 476 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 HPGDP15428 266 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 RPA2P15927 270 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 LBPP18428 481 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 UGT1A6P19224 532 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 U2AF2P26368 475 aaKnown RBP eCLIP5.07□□□□□ -1.6
PCF11-202ENST00000528336 PSMB4P28070 264 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 IER3P46695 156 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 SLC11A1P49279 550 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 STARP49675 285 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 CLCN4P51793 760 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 PPP1R8Q12972 351 aaKnown RBP5.07□□□□□ -1.6
PCF11-202ENST00000528336 KRT31Q15323 416 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 PHKG1Q16816 387 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 KRTAP27-1Q3LI81 207 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 USH1GQ495M9 461 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 SLC35D3Q5M8T2 416 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 NCR3LG1Q68D85 454 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 TMEM207Q6UWW9 146 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 NANOGNBQ7Z5D8 188 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 FAM228AQ86W67 206 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 NKAIN4Q8IVV8 208 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 MARVELD2Q8N4S9 558 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 ANKRD13CQ8N6S4 541 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 BCORP1Q8N888 145 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 STKLD1Q8NE28 680 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 UBLCP1Q8WVY7 318 aaPredicted RBP5.07□□□□□ -1.6
PCF11-202ENST00000528336 DYRK2Q92630 601 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 ISG20Q96AZ6 181 aaKnown RBP5.07□□□□□ -1.6
PCF11-202ENST00000528336 MSANTD3Q96H12 275 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 FAM71F1Q96KD3 344 aaPredicted RBP5.07□□□□□ -1.6
PCF11-202ENST00000528336 GON7Q9BXV9 100 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 SLC2A11Q9BYW1 496 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 PANK2Q9BZ23 570 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 CRNKL1Q9BZJ0 848 aaKnown RBP5.07□□□□□ -1.6
PCF11-202ENST00000528336 NMNAT2Q9BZQ4 307 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 NAPBQ9H115 298 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 TLE6Q9H808 572 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 FN3KRPQ9HA64 309 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 ITGB4P16144 1822 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 GAKO14976 1311 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 PAPPAQ13219 1627 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 MSGN1A6NI15 193 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 F8VZ95 297 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 K7ERQ8 282 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 EPHB6O15197 1021 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 AP5Z1O43299 807 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 ATP9AO75110 1047 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 SNNO75324 88 aaPredicted RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 CRYGCP07315 174 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 ZNF853P0CG23 659 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 SPP1P10451 314 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 SAGP10523 405 aaPredicted RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 F3P13726 295 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 CTNNA2P26232 953 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 NUP62P37198 522 aaPredicted RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 CETN2P41208 172 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 MAGEB1P43366 347 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 LBX1P52954 281 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 SLC8A3P57103 927 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 RPL23AP62750 156 aaKnown RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 HSF2Q03933 536 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 SLC39A6Q13433 755 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 PDIA5Q14554 519 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 ANKRD55Q3KP44 614 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 MPPE1Q53F39 396 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 LCN1P1Q5VSP4 162 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 LRRC38Q5VT99 294 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 PTAR1Q7Z6K3 402 aaPredicted RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 LACC1Q8IV20 430 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 FAM9CQ8IZT9 166 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 C17orf47Q8NEP4 570 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 BBS1Q8NFJ9 593 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 VANGL1Q8TAA9 524 aaPredicted RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 WBP2Q969T9 261 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 EFHD2Q96C19 240 aaPredicted RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 CDKN2AIPNLQ96HQ2 116 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 SPATA33Q96N06 139 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 ANKRD27Q96NW4 1050 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 MRPL13Q9BYD1 178 aaKnown RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 VAT1LQ9HCJ6 419 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 AGPAT3Q9NRZ7 376 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 RNF186Q9NXI6 227 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 OR6C2Q9NZP2 312 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 PPP2R2CQ9Y2T4 447 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 KCPQ6ZWJ8 1503 aa5.06□□□□□ -1.6
PCF11-202ENST00000528336 SIPA1L3O60292 1781 aaPredicted RBP5.06□□□□□ -1.6
PCF11-202ENST00000528336 ZNF831Q5JPB2 1677 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 HEG1Q9ULI3 1381 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms